| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3527 |
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| Symbol | torD |
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| ID | 6117859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4305600 |
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| End bp | 4306271 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635078 |
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| Product | chaperone protein TorD |
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| Protein accession | YP_001761886 |
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| Protein GI | 170727860 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00640401 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGGAA GTAATATGAG TGCAAGTGAA ATGAATGCTA GTGAGATGAA TAGTGTTGCA
GTAGTTAATC AGGCGAGAGC TATGGTCTAT CGACTACTCT CATCTTTGTT CGCTAAGGAG
GTTGATCATC AACTTCTGCA TGAATTAACC GGTGAGCAGG CACAGGCCTT TTTGGCACAA
CTTGCCAGTG AGCCAGCATT CAAACAAGAT ATCGATACAT TAATATCTGT CCTGAATACG
TTAAAAACTG ATAAGGCACT ACTGGAACTT GCAGCGGATT ACTGCGGCTT GTTCCTAGTT
GGAACAAAAC ACAGTGCCTC ACCTTATGCC AGCTTGTATC TTAATGAAGC TGGTAGTGAA
ACACCTCTGT TTGGCGAGCA ACATCAGCAG ATGGTGCAGT TTCTAAAGCA GAGTCAGCTG
CAGGTTCAAA CCAGCTTTCC AGAGCCTGCC GATCACATCG CGGTGATCTT AGCCTATGCC
GAACATATCT GCCTAAACAG CGGCGATGCA GAGCAACTCA AGTTTATTGA GTCCTACCTC
AATACTTGGT TAGGTAACTT TGCCGCTAAA GTGACCCAAT GCGACACAGG GACATTTTAC
AGTGCCTTGG CACGCCTGAC TCAAAGCTGG GTCACTTCAG ATCTCGAAGG TCTGACCCAA
ACGACTCACT AA
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| Protein sequence | MNGSNMSASE MNASEMNSVA VVNQARAMVY RLLSSLFAKE VDHQLLHELT GEQAQAFLAQ
LASEPAFKQD IDTLISVLNT LKTDKALLEL AADYCGLFLV GTKHSASPYA SLYLNEAGSE
TPLFGEQHQQ MVQFLKQSQL QVQTSFPEPA DHIAVILAYA EHICLNSGDA EQLKFIESYL
NTWLGNFAAK VTQCDTGTFY SALARLTQSW VTSDLEGLTQ TTH
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