| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3526 |
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| Symbol | |
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| ID | 6117858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4303077 |
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| End bp | 4305569 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635077 |
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| Product | trimethylamine-N-oxide reductase TorA |
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| Protein accession | YP_001761885 |
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| Protein GI | 170727859 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.170885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA GAGACTTTCT AAAAGGTTTA GTATCAACAT CTTATGTTGT CCTAAGCGGC
GCGTCTGTAC TAGCTCCACT CAATGCTCTC GCCGCTGCTG GTGCTAAGAA AGATGATGGC
TGGTTAACCA CTGGTTCACA TTTCGGCGCA TTCAAAATGA AGCGCAAAAA TGGGGTTATC
GATCAGGTTA TCCCGTTTGA TAGTGATAAG TACCCTACCG ACATGATCAA TGGCGTTAAA
GGCTTAGTCT ATAACCCATC TCGTGTTCGT TACCCTATGG TACGATTAGA CTTTTTGTTA
AATGGTCATA AAAGTAATAC CAGTCAACGT GGTGATTTCC GTTTCGTTCG TGTGACTTGG
GATAAGGCAC TTCACCTACT AAAAGATTCA CTGGATGAGG TACAAACCAA GTACGGTCCA
TCGGGTCTTC ATGCAGGTCA AACAGGCTGG CGTGCAACGG GTCAATTACA CTCTTGTACT
AGCCATATGC AGCGCGCTAT CGGCATGCAC GGTAACTTCG TTAAGAAGAT TGGTGATTAC
TCTACTGGTG CTGGTCAAAC GATTCTGCCT TACATTTTAG GTTCGACAGA GGTTTACGCA
CAGGGCACCT CTTGGTCATT GATCCTTGAA GAATCTGACA CCATCATTTT ATGGTCGAAC
GATCCTTATA AGAACCTTCA AGTGGGCTGG AATGCAGAGA CTCATGAGTC TTACGCTTAT
CTTGCTCAAC TAAAAGAGAA GGTTAAGCAG GGCAAGATCC GCGTGATCAG TATCGACCCT
GTGGTCACTA AGACTCAGAA ATACCTTGGT TGTGAGCAGC TTTACGTTAA CCCACAAACA
GATGTGGCGT TAATGTTGGG TATTGCCCAC GAGATGGTGA CTAAGAATCT GCATGACACT
AAATTTATCG AAGGTTACAG CTTAGGTTTC GACCAATTCC TGCCTTACCT AATGGGTGAG
AGTGACGGTG TTGCTAAAAC TCCTGAGTGG GCATCAGAGA TCACAAGTGT TAGCCCAGAG
ATCATTCGCG ACTTAGCAAA AGTGATGACC AAAGGTCGTA CTCAGATGCT AATGGGCTGG
TGTATTCAGC GCCAACAGCA CGGTGAGCAA CCATACTGGA TGGCAGCGGT TCTGGCCACA
ATGATAGGCC AAATTGGTCT TCCAGGCGGC GGGATCAGCT ATGGTCACCA CTACTCAAGT
ATTGGTGTAC CTTCATCAGG CGCGGCAGCA CCAGGGGCTT TCCCACGTAA CTTAGATGAA
GATCAAAAGC CTATCTTTGA TAGCAATGAC TTCAAAGGCG CAAGCAGCAC AATCCCTGTT
GCTCGTTGGA TTGATTCAAT TTTAGAGCCA GGCAAGACTA TCGACGCTAA TGGCTCGAAA
GTGACTTTCC CTGATATCAA GATGATGGTT TTCTCGGGCA ATAACCCATG GAACCACCAT
CAAGATAGAA ACAGAATGAA GCAAGCGTTC CATAAGCTTG AGTGTGTTGT CAGTATCGAT
GTCAACTGGA CGGCAACCTG TCGATTCTCA GATATCGTAT TGCCAGCGTG TACTACGTTT
GAGCGTAACG ATATCGACAT CTATGGCAGT TACGCTAACC GCGGCCTGCT AGCGATGCAG
AAGATGGTCG AGCCACTCTA TGAAAGTCTC TCCGATTTTG AGATCTTCAC TCGATTTGCA
GCCGTTCTGG GTAAAGAGAA AGAGTACACC CGTGGCATGT CAGAGAAAGA CTGGCTTGTT
AAGCTCTATA ACGACTGTAA AGCGGCTAAC GCTGGTAAGT TCGAAATGCC TGACTTTGAA
GGTTTCTGGA AAGAGGGTTA CGTCTACTTC GGTGAAGGTA AGCCTTGGAC TCGCCACGCA
GACTTTAGAG AAGATCCTGA GATTAACCCG CTGGGCACAC CTTCAGGCCT TATTGAGATC
TTCAGCCGTA AGATAGCTCA GTATGGTTAT GATGACTGCC CAGGCCACCC AACTTGGATG
GAGAAAGCGG AGCGTAGTCA CGGCGGACCA GGTTCAAACA AGTTCCCGGT ATGGATGCAG
TCTTGCCATC CGGACAAACG TCTTCACTCA CAGATGTGTG AATCTGCTGA GTTCCGTGAA
ACCTATGCGG TAAAAGGACG TGAGCCTGTG TATATGAGCC CTGCTGATGC AAAACAGCGT
GGTATTAAGA GCGGTGATAT CGTTCGCGTC TTCAATGACC GTGGTCAACT ACTTGCCGGT
GCAGTTGTTT CAAACAACTA TCCTCAAGGT GTTATCCGCA TTCAAGAGGG TGCTTGGTAT
GGTCCAGTTG GTGCAGATGG CAGCAAAGAG GGTGGCGCTA AAGTCGGTGC ACTTTGTAGT
TATGGCGATC CGAATACCTT AACTATGGAT ATCGGAACAT CTAAGCTGGC TCAAGCCTGC
TCAGCCTACA CATGTTTGGT TGATTTTGAG AAGTATAAAG GCAAAGTACC TGAAGTTAGC
TCATTCAGCG GCCCAATTGA AACTCAGATT TAA
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| Protein sequence | MKRRDFLKGL VSTSYVVLSG ASVLAPLNAL AAAGAKKDDG WLTTGSHFGA FKMKRKNGVI
DQVIPFDSDK YPTDMINGVK GLVYNPSRVR YPMVRLDFLL NGHKSNTSQR GDFRFVRVTW
DKALHLLKDS LDEVQTKYGP SGLHAGQTGW RATGQLHSCT SHMQRAIGMH GNFVKKIGDY
STGAGQTILP YILGSTEVYA QGTSWSLILE ESDTIILWSN DPYKNLQVGW NAETHESYAY
LAQLKEKVKQ GKIRVISIDP VVTKTQKYLG CEQLYVNPQT DVALMLGIAH EMVTKNLHDT
KFIEGYSLGF DQFLPYLMGE SDGVAKTPEW ASEITSVSPE IIRDLAKVMT KGRTQMLMGW
CIQRQQHGEQ PYWMAAVLAT MIGQIGLPGG GISYGHHYSS IGVPSSGAAA PGAFPRNLDE
DQKPIFDSND FKGASSTIPV ARWIDSILEP GKTIDANGSK VTFPDIKMMV FSGNNPWNHH
QDRNRMKQAF HKLECVVSID VNWTATCRFS DIVLPACTTF ERNDIDIYGS YANRGLLAMQ
KMVEPLYESL SDFEIFTRFA AVLGKEKEYT RGMSEKDWLV KLYNDCKAAN AGKFEMPDFE
GFWKEGYVYF GEGKPWTRHA DFREDPEINP LGTPSGLIEI FSRKIAQYGY DDCPGHPTWM
EKAERSHGGP GSNKFPVWMQ SCHPDKRLHS QMCESAEFRE TYAVKGREPV YMSPADAKQR
GIKSGDIVRV FNDRGQLLAG AVVSNNYPQG VIRIQEGAWY GPVGADGSKE GGAKVGALCS
YGDPNTLTMD IGTSKLAQAC SAYTCLVDFE KYKGKVPEVS SFSGPIETQI
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