| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3516 |
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| Symbol | |
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| ID | 6117848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4288782 |
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| End bp | 4289783 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635067 |
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| Product | peptidase U32 |
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| Protein accession | YP_001761875 |
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| Protein GI | 170727849 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGC TGTGCCCAGC AGGTAATTTG GCATCACTAA AAACCGCCCT GAACGCAGGT
GCAGATGCCG TCTACTTAGG ACTAAAGAAT GACACAAATG CACGCTCATT CGCAGGACTT
AACTTTACCC CAAAAAAGCT ACAAGAAGCC GCCCAGTATA CTAAGCAGCA GGGTAAAAAG
ATCTTCCTGA CCATCAATAC CTTCCCTAAA CCTGGAGAGG AAAAGCGTTG GTATGAGGCG
GTCGATATTG CCGCAAATAC AGGCGTAGAT GCACTCATCA TCGCTGATCT GTCGTTATTA
GATTATGCCC ACAGCCATTA TCCTCATCTC CCTCTTCATC TCTCGGTGCA AGCCAGTGCT
ACCAACCTTG GTGCTCTTAA GCTGTATAAA GAGGAGTTTA ATATTCAGCG CGCGGTACTT
CCCAGAGTTC TGTCGATGAA ACAGGTGAGA GATCTAAGTA AGGTCACTCC AGTGGATCTT
GAAGTGTTTG CTTTTGGCAG CCTGTGTATT ATGGCCGAAG GCCGTTGTCA CCTGTCATCT
TATGTAACGG GACAATCACC AAACACTGGT GGTTCATGCT CACCCGCAAA GCATGTACGT
TGGCAAGAGG AGGGAGAGAA CAGGTTAACT CGGCTCAATG AGGTGTTAAT CGATAAATCA
GGTATCGATG AGCAGATGGG CTACCCTGTC GTCTGCAAAG GTCGTTACAC CACAGAACAT
AACAGCACTC CAACCCATCT ATTAGAGTCG CCAACCAGTC TAAACACCCT AAGCTTACTG
CCCGAGTTGG CTAAGGCAAA TGTGGTCTCT TTAAAAATAG AGGGCCGTCA GCGTAGTCCC
GCCTATGTCG AGCAGGTGAC TCAGGTGTGG CGACGCGCTA TCGATACCTA CCTAAATAAT
CCTGATAATT TTCAAACTCA AGTTGAATGG GATAGAGCAT TAGCCAAAGT ATCCGAAGGA
CAGACGACCA CCCTTGGCGC CTATGAGCGC ACATGGCAGT AA
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| Protein sequence | MELLCPAGNL ASLKTALNAG ADAVYLGLKN DTNARSFAGL NFTPKKLQEA AQYTKQQGKK
IFLTINTFPK PGEEKRWYEA VDIAANTGVD ALIIADLSLL DYAHSHYPHL PLHLSVQASA
TNLGALKLYK EEFNIQRAVL PRVLSMKQVR DLSKVTPVDL EVFAFGSLCI MAEGRCHLSS
YVTGQSPNTG GSCSPAKHVR WQEEGENRLT RLNEVLIDKS GIDEQMGYPV VCKGRYTTEH
NSTPTHLLES PTSLNTLSLL PELAKANVVS LKIEGRQRSP AYVEQVTQVW RRAIDTYLNN
PDNFQTQVEW DRALAKVSEG QTTTLGAYER TWQ
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