Gene Swoo_3511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3511 
Symbol 
ID6117843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4283768 
End bp4284610 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content46% 
IMG OID641635062 
Productputative signal transduction protein 
Protein accessionYP_001761870 
Protein GI170727844 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACTG AACATCAATT GTTGGTCGGC CTTTTAAAAA AGTTGAAAGC AGATGCATTA 
GTGTTGCCAA CGCTTCCAGA GGTTGCGATG AGGGTTCAAG AGGTCGTATC CAGACCGGAT
TCAAGTCCAA AGCAGGTTGC TGAAATTATC GGACAAGACG CCGCGATATC GGCGCGTATG
ATTAAGGTGG CTAACAGTGC ACTTTATAGC AGGGGAATTA AAGCTGAAAA TGTAAACTGT
GCGGTCACTC GAATTGGCTT AACTCAGATA AAATCCATCG CGACTTCTGC GGCGATGGAG
CAGCTCTTTA TTTCAACCAA TGAGATGGTC TGGGAGGTGA TGGATGAAGT GTGGGGAAGC
TCAATCGATG TGACCTCTGC GGCTTGCTCT ATGCTGCAAA TCTATAATAA AACCCATAAG
GGATGTGGAC TCAGTTTTGA TACGCTGACT TTAGCCTGTT TAGTGCATAA CATAGGTGCT
CTGCCTGTGC TTAAAGAAGC AGAAGCCCAT CCCGATATGT TTACTAGTAT AGAGCAGCTA
AGAGCGTTAG TGAGAAAGAT GCAGGGGCCA ATAGGTCGCG CCGTATTGAA GAGTTGGGAG
TTTGCACCGG AAGTGACAGA GGTGGTTGAG AGATGGTCAG ACCTATCTTA TCTACCTGAT
AACGTGGGTT ATCTTGATTT TGTTAGGGCC GCCGCTTTTT ACACTGGAGA GTTAAGGGCT
GGTATTGAGC TTGAGGAACG ATTAGATCTG TATGCTAAAC GTGGTCTGCC CGTTTCGGCT
GAGGAGTTAG CCAGTGACGA GTTTCTGGAA AAATATCACT CTATAAAATC GAGTTATGAA
TAG
 
Protein sequence
MSTEHQLLVG LLKKLKADAL VLPTLPEVAM RVQEVVSRPD SSPKQVAEII GQDAAISARM 
IKVANSALYS RGIKAENVNC AVTRIGLTQI KSIATSAAME QLFISTNEMV WEVMDEVWGS
SIDVTSAACS MLQIYNKTHK GCGLSFDTLT LACLVHNIGA LPVLKEAEAH PDMFTSIEQL
RALVRKMQGP IGRAVLKSWE FAPEVTEVVE RWSDLSYLPD NVGYLDFVRA AAFYTGELRA
GIELEERLDL YAKRGLPVSA EELASDEFLE KYHSIKSSYE