| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3506 |
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| Symbol | |
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| ID | 6117838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4275749 |
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| End bp | 4277035 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635057 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001761865 |
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| Protein GI | 170727839 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTT CAGCATTTGA CCTATCCCCT CTCATTCTTG ACGCCGTTGA AGTGTGTGGA
TATCAGCAGC TAACACAAGT GCAATCAAAA GTGATCCCTG TAGCTGTAAC TGGCTGTGAT
CTAATGGCTT GTGCGGAAAC CGGCACCGGG AAAACTGCTG CATTTGCATT GCCACTGTTG
CAAAAACTAT TGGATGAATT CTTAGATAGA AGCGCACTGA GGGGATTGAT ACTGACACCA
ACACGTGAAC TTGCGATTCA GGTTGCTGAT AATATCTCAC GTTATAGCCA GTTCACTTCG
CTGAAAACCT TGGCGGTTTA CGGTGGTGCA AATATGAACC CACAGCGTAA AGCGTTAAAT
GCTGGTGTGG ATATCTTAGT AGCCACACCT GGACGTTTGT TCGATTTTAT CGGCCAACAT
GGTTTAGACC TTTCAAGTGT TACCAGTCTT GTGATCGATG AAGCCGACAG AATGTTGGAT
ATGGGCTTTG TGCGCGATAT CGAGCGTGTA AAAGGGTTGG TTGCTCGCCA ACATGTGACC
CATTTCTTCT CGGCAACCTA TAGCGATGAT GTCAAATGCT TAGCACAGAA GATGCTCTGT
GATCCGACAT GGATCAATGT TGCCACCAGT AAGTCGGCAT CGAGCGTCGA GCAAGAGGTT
TATCTTGTCG ATAAGCGCCG TAAAGCGGAG TTACTTTCTG AGCTGGTTGG CCGCAATAAC
TGGCAACAGG TGTTGGTATT TGCTAGCTCA AAAGAGAGTG CAGAGCATAT CCAGAAAGAG
TTAAAGCTCG ATGGATTGAA GAGTGCTGTT TTTCACGGTG ATAAAACTCA AGGGGCACGT
AATCGCGCGC TAGAGGAGTT TAAAAGCGGT GCCCTGCGTG TGCTGGTGGC CACTGATGTT
GCTGCCAGAG GACTTGACAT TCACGCACTG CCTCTCGTGG TCAATATTGA GTTGCCTTTT
GATGCTCAAG ATTATATTCA TCGTATTGGG CGTACAGGCC GTGCAGGTTT GACTGGACAT
GCTATCTCTT TTGTCTGCCC ATCAGATGAG AAGATGCTCG AGGAGATTGA AGCGTTAATT
GAGCGCAAAT TACCCCGTAT TGTCGTGCCT GGTTATGAAC AGGGCACAGC GCTTCCGGCC
CGCTATCGTG ACAGTGTTGA GGTCGCGCCT AATAAGAAAC GTGTCGAGAG ACGCAAAGGC
AAGCCTGCGG GGAGAAAAGA GCAAACTCGT CGCACTAAGT CCACAAGCGA TAAGAGCAGT
TACTCAAGTC GTAGAAGTAA GAGATAA
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| Protein sequence | MKFSAFDLSP LILDAVEVCG YQQLTQVQSK VIPVAVTGCD LMACAETGTG KTAAFALPLL
QKLLDEFLDR SALRGLILTP TRELAIQVAD NISRYSQFTS LKTLAVYGGA NMNPQRKALN
AGVDILVATP GRLFDFIGQH GLDLSSVTSL VIDEADRMLD MGFVRDIERV KGLVARQHVT
HFFSATYSDD VKCLAQKMLC DPTWINVATS KSASSVEQEV YLVDKRRKAE LLSELVGRNN
WQQVLVFASS KESAEHIQKE LKLDGLKSAV FHGDKTQGAR NRALEEFKSG ALRVLVATDV
AARGLDIHAL PLVVNIELPF DAQDYIHRIG RTGRAGLTGH AISFVCPSDE KMLEEIEALI
ERKLPRIVVP GYEQGTALPA RYRDSVEVAP NKKRVERRKG KPAGRKEQTR RTKSTSDKSS
YSSRRSKR
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