Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3486 |
Symbol | |
ID | 6117818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4262567 |
End bp | 4263247 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641635039 |
Product | RES domain-containing protein |
Protein accession | YP_001761847 |
Protein GI | 170727821 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.101439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTTCAA CATTAACGAG TGAAAAGGCC TATCGCCTAG TTAATACCCG ATTTCCTGCA ATCGACATCT TTGACGACTG TGCCAGTGTT GAAGAGTTTG AAGTGCTGTT TGCCCTTCAG AGCTTAACCA ACCCTAGATT GCAAAATGAG GTTGGCGATC TCACCTTGTT GAGTAATGAC CAAATTCCAT TTGGGATCAC AGGATGCTCC TATGCCACCG CCTCTTTTAC CCATATAAAT AGAGATGGCA GCAGGTTTTC TAATGGCGAG TTTGGTGTCT TATACATGGC TGACACCATG AAAACCGCGA TTGCAGAAAC CCGTTACCAT GTTCAAAAGA TGCTCTCTCT TATTGAAGGA CTGCATTTTG AAATGATCGT GATGAAAGGG CTATCCTGCA CCATAAGTGG CGAGTTAATT GATATTAGAG CTAATACAAT TGCACAAATG CAAACAACTG ATATTTATCA CCATACTGAT TACACAGCCT CCCAACATTT AGGGTTTAAA TACCGAAAAC AAGCAGTGGA AGGACTACAC TACACAAGTG TTCGAAACCC TATGTCCAGC TGCTATGCAC TGTTTACGCC TAAAAGAGTA GAAGAGATCA TCCAGTCAAC ACATTACGAA TATGTATGGG ATGGCAAATC TATAGAGGTA AGAGGCATAA CAGCAATTTA A
|
Protein sequence | MSSTLTSEKA YRLVNTRFPA IDIFDDCASV EEFEVLFALQ SLTNPRLQNE VGDLTLLSND QIPFGITGCS YATASFTHIN RDGSRFSNGE FGVLYMADTM KTAIAETRYH VQKMLSLIEG LHFEMIVMKG LSCTISGELI DIRANTIAQM QTTDIYHHTD YTASQHLGFK YRKQAVEGLH YTSVRNPMSS CYALFTPKRV EEIIQSTHYE YVWDGKSIEV RGITAI
|
| |