Gene Swoo_3486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3486 
Symbol 
ID6117818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4262567 
End bp4263247 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content42% 
IMG OID641635039 
ProductRES domain-containing protein 
Protein accessionYP_001761847 
Protein GI170727821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.101439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTCAA CATTAACGAG TGAAAAGGCC TATCGCCTAG TTAATACCCG ATTTCCTGCA 
ATCGACATCT TTGACGACTG TGCCAGTGTT GAAGAGTTTG AAGTGCTGTT TGCCCTTCAG
AGCTTAACCA ACCCTAGATT GCAAAATGAG GTTGGCGATC TCACCTTGTT GAGTAATGAC
CAAATTCCAT TTGGGATCAC AGGATGCTCC TATGCCACCG CCTCTTTTAC CCATATAAAT
AGAGATGGCA GCAGGTTTTC TAATGGCGAG TTTGGTGTCT TATACATGGC TGACACCATG
AAAACCGCGA TTGCAGAAAC CCGTTACCAT GTTCAAAAGA TGCTCTCTCT TATTGAAGGA
CTGCATTTTG AAATGATCGT GATGAAAGGG CTATCCTGCA CCATAAGTGG CGAGTTAATT
GATATTAGAG CTAATACAAT TGCACAAATG CAAACAACTG ATATTTATCA CCATACTGAT
TACACAGCCT CCCAACATTT AGGGTTTAAA TACCGAAAAC AAGCAGTGGA AGGACTACAC
TACACAAGTG TTCGAAACCC TATGTCCAGC TGCTATGCAC TGTTTACGCC TAAAAGAGTA
GAAGAGATCA TCCAGTCAAC ACATTACGAA TATGTATGGG ATGGCAAATC TATAGAGGTA
AGAGGCATAA CAGCAATTTA A
 
Protein sequence
MSSTLTSEKA YRLVNTRFPA IDIFDDCASV EEFEVLFALQ SLTNPRLQNE VGDLTLLSND 
QIPFGITGCS YATASFTHIN RDGSRFSNGE FGVLYMADTM KTAIAETRYH VQKMLSLIEG
LHFEMIVMKG LSCTISGELI DIRANTIAQM QTTDIYHHTD YTASQHLGFK YRKQAVEGLH
YTSVRNPMSS CYALFTPKRV EEIIQSTHYE YVWDGKSIEV RGITAI