| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3481 |
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| Symbol | |
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| ID | 6117813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4256280 |
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| End bp | 4257371 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641635034 |
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| Product | TonB family protein |
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| Protein accession | YP_001761842 |
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| Protein GI | 170727816 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00509083 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0825777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTTG AATCTGGTTT ACGGAAATCA CTTTTCGCGG CAACCTTGAG TTTAGCTCTA
TGTAGTGCCA CGAGTTTTAC TGTCTCGGCT TCAGAGTTCT CTGATAGTTA TGCTGCATAC
CAGTCTGCTG TGAGTGATAA AAACTACTCA GATGCTCAGG TATATGCAGA TAAAGCTTAT
CAATTAGGAA AAGAGATATA TCCAAAAGGG AGCTTAGATT TGGCTAACCT TGCCCTAAAT
TTAGGGAGTG CTTTAGAGAT CAATGAGAAG CAAACTCAGG CCTTTGATGC ATACAGCCAA
GCTTTAGCTA TTTATCAAAC ACATTTTGAT GATGACGCGA TCGAGCTGAT TGAACCCTTA
ATTGGCGCAG CTGGTACTGC TGAAAAACCT AAAGTAGCGA GAAAATACTT TATTCAGGCT
ATCGATATTG CTGAAGATGC TGACGATCCC ATATTGCTAG CCAATACCTT AATGTCAGCA
TTTAACAAGC TTTCCAAAAC TCCACTCTAC AGTCGAAAGA TTCAAAATTA TGCCATTAAG
GCGTTTGAGA TCTATGAGGA TGAGTTACCT GAAGACGCTA TGGCTCGCGT CAGAGCTACT
TATATTGTAG GCATGATACG TAAATCTAAA AAACAAGATG CTAAAGCTAT TGAGTTACTC
AATAAGGTAG TGAAGCAGTT CTCTGTGCTG GATTACAGTC ATCCTTATGA GTTAGCCTCC
CACGCGCAAC TGGTCGAGCT CTATGAGAAA AAAGGTCTGA GTGAGAAGTC TACTCAACAT
TGTATCGCTA TTGGCAGTAT GCGTCCTTGG CTAGATACTC AGGAACAAGT ACCTCTTTAC
CGTTTACCGC CTAAATATCC AGTTAACTCG GCAAGAGCGG GTAGAGAGGG AATGGTACAG
CTCTCTTTTA TTGTCGATGA GTCAGGCTTT GTTACTGAGC CTAAAGTAAT CATGTCGGAG
GGTGGAAGCG GCTTTGAGAA AGAGTCATTA AAGGCGATCA AACATTGGCG ATATGCACCT
AAATTTGTCG ATGGAAAACC CGTTGCAGCG CCAAGCACGG TGCAGCTAGA TTACACTATG
GCAAAATCAT AG
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| Protein sequence | MQFESGLRKS LFAATLSLAL CSATSFTVSA SEFSDSYAAY QSAVSDKNYS DAQVYADKAY
QLGKEIYPKG SLDLANLALN LGSALEINEK QTQAFDAYSQ ALAIYQTHFD DDAIELIEPL
IGAAGTAEKP KVARKYFIQA IDIAEDADDP ILLANTLMSA FNKLSKTPLY SRKIQNYAIK
AFEIYEDELP EDAMARVRAT YIVGMIRKSK KQDAKAIELL NKVVKQFSVL DYSHPYELAS
HAQLVELYEK KGLSEKSTQH CIAIGSMRPW LDTQEQVPLY RLPPKYPVNS ARAGREGMVQ
LSFIVDESGF VTEPKVIMSE GGSGFEKESL KAIKHWRYAP KFVDGKPVAA PSTVQLDYTM
AKS
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