| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3477 |
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| Symbol | |
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| ID | 6117809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4251741 |
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| End bp | 4252622 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635030 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001761838 |
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| Protein GI | 170727812 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.171034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00323812 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTAGCTC AAGCCACAAC CCAATACCAA CAACGCGTTG ATAACCAGCT TACACAGGTT
ATCGATGCTC AATCTGTGAC AGACTCTCAA CTACTGGCAG CAATGAAACA TGGTGCCCTG
ATTGGCGGGA AGCGTATTCG CCCTTTTCTG GTTTATGCCA TAGGTGAGAT GCTCAATGTT
CCACAGGAAA AATTAGATGC AGCTGCAGCG GCCATAGAGT GTATACATGC CTACTCTTTA
ATCCATGACG ATCTACCCGC CATGGATGAT GACGCCCTGC GCCGTGGGCA ACCAACGGTT
CATGTTGCCT TTGATGAAGC AACGGCTATT TTGGCAGGTG ACGCCCTACA AGCCTTAGCA
TTCGATATTT TAAGTCAACC CATTGATGGC CTAACACCCA CACAGAATCT GGCGATGGTT
CGCGCATTAG CCAAAGCCTC CGGTTATTCT GGAATGTGTG GTGGACAAGC GATGGATCTC
AACGCAACCG ATAAGCAGAT AGATTTAGCC ACCCTGACCC AACTACACAA ACTAAAAACA
GGTGCCTTAA TCCGCTGTGC TGTCGAACTG CCAATGATCG CCGCTGACCT GCCAAAAGAT
GAGCAGGCAC TACTAATGAC TTTCGCCGAT GCAGTTGGCT TAGCTTTTCA GGTACAAGAT
GATGTGATTG ATATCATCTC CAGCACCGAA GAGCTGGGAA AACCTCAAGG CTCAGATTGT
GATTCCAACA AGAGTACTTA CCCAAAACTA CTTGGATTAG ACGGTGCAAA AGCCACCGCC
GAGAGTTTGA TACAAGATGC TCTATCAGCG CTGACAAAAT TACCATACAA TAGTCAGCTA
ATTGCCGAAT TCGCCCGTTT TATCATTGAG CGAAGAGTAT AA
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| Protein sequence | MLAQATTQYQ QRVDNQLTQV IDAQSVTDSQ LLAAMKHGAL IGGKRIRPFL VYAIGEMLNV
PQEKLDAAAA AIECIHAYSL IHDDLPAMDD DALRRGQPTV HVAFDEATAI LAGDALQALA
FDILSQPIDG LTPTQNLAMV RALAKASGYS GMCGGQAMDL NATDKQIDLA TLTQLHKLKT
GALIRCAVEL PMIAADLPKD EQALLMTFAD AVGLAFQVQD DVIDIISSTE ELGKPQGSDC
DSNKSTYPKL LGLDGAKATA ESLIQDALSA LTKLPYNSQL IAEFARFIIE RRV
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