| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3474 |
|---|
| Symbol | motB |
|---|
| ID | 6117806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4249324 |
|---|
| End bp | 4250292 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641635027 |
|---|
| Product | flagellar motor protein MotB |
|---|
| Protein accession | YP_001761835 |
|---|
| Protein GI | 170727809 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.1847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000424499 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAC AAAAGTGTGA CTGTCCACCT CCCGGAGCGC CTCTCTGGTT AGCAACCTTT
GCTGATCTTA TGTCACTACT TATGTGTTTC TTCGTACTGT TACTGTCATT TTCTGAGATG
GATGTGCTGA AGTTTAAGCA GATCGCCGGT TCGATGAAGT ATGCTTTTGG TGTCCAGAAT
AAAGTAGAAG TTAAAGATAT CCCCAAAGGG ACATCGGTCA TCGCCCTTGA GTTCAGGCCC
GGTCGTCCTG AGCCAACTCC CATTGAGACC ATTACTCAAC AAACCAGTGA AATTACTGAA
CCTGTTATCG AATATCAGGC CGGTGAAGAT GACAGTTCGG GTGGTAGTCA AAAGCAGCAA
GGCCAGCAAA GAGGTGGTGA GTCCTCTGCT ACTGCGCAGG AGCAGTCTGT TGCTCAATCA
TCATCGGATT CAGAGTCTGA AGCTAAGGCA AAAGAGGAGT CTGATGCTCA AGCTGCTGCT
CAGGAAAATA TTAATGAGCA GGTAAAGAAG ATGGCTCAGG AGCTAAATAC TGAGATTGTT
GATGGTGCGA TAGAGATTGA GTCTTTAGGT CAGCAGATCA TTATTCGTAT CCGTGAGAAG
GGCGCCTTCT CGTCAGGTTC AGGTTTCCTA CAACCAAGGT TTAAACCTGT GGTTCGTCGA
GTGGGTGAGT TATTAAAAGA TGTCCCAGGG ATAGTGACAG TGTCGGGACA CACCGATGAT
ATGAATATCA GTAATGAGCT TTATAGCTCT AATTGGGACC TATCCAGTAA ACGCGCCGTA
GCGGTTGCTC ATGAGCTGAT TAAAGTGAAA GGCTTTGATC CACAAAGAAT GAAGGTGGTT
GGCATGGCAA ACTCTGATCC GCTTGTGGCA AATGATACCA GTAGTCATCG TGCCCGTAAT
CGCAGGGTTG AGATTGCCAT TGAGCAAGGT AAAGCCATGG AGTCTGATGA GATCACGGTA
GAGCCATAG
|
|---|
| Protein sequence | MAKQKCDCPP PGAPLWLATF ADLMSLLMCF FVLLLSFSEM DVLKFKQIAG SMKYAFGVQN
KVEVKDIPKG TSVIALEFRP GRPEPTPIET ITQQTSEITE PVIEYQAGED DSSGGSQKQQ
GQQRGGESSA TAQEQSVAQS SSDSESEAKA KEESDAQAAA QENINEQVKK MAQELNTEIV
DGAIEIESLG QQIIIRIREK GAFSSGSGFL QPRFKPVVRR VGELLKDVPG IVTVSGHTDD
MNISNELYSS NWDLSSKRAV AVAHELIKVK GFDPQRMKVV GMANSDPLVA NDTSSHRARN
RRVEIAIEQG KAMESDEITV EP
|
|---|
| |