Gene Swoo_3469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3469 
Symbol 
ID6117801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4245186 
End bp4245575 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content46% 
IMG OID641635022 
Producthypothetical protein 
Protein accessionYP_001761830 
Protein GI170727804 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0108117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000383928 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTAAAG GTTTTCTGTT ATTGGCAGCG TTAAGTGGCT TTATCTCTGT TGCATTGGGG 
GCATTTGGTG CCCATGGATT AAAAAATGTG GCATCGCCTG AGATGATCGC CATTTTTAAT
CTTGGGGTTG AGTATCAGTT CTATCATACG TTTGCACTTA TCGCTGTGGC GTTTGCAGGT
CATTGGCTAA GTTCTCGTTT GCTGGATTGG GCTGGATATC TCTTTATCGC GGGCATGCTA
CTTTTTTCAG GCTCCTTGTA TCTTTATGCG CTACTTGGTA CTAAGTGGAC TGGACCTATT
ACCCCTATGG GCGGCGTGTG CTTCTTAGTC GGTTGGTTGT TGATCGCACT TGCTGTGTGG
CGTAATCGAG TCGTTGAGCT TAACGATTAA
 
Protein sequence
MRKGFLLLAA LSGFISVALG AFGAHGLKNV ASPEMIAIFN LGVEYQFYHT FALIAVAFAG 
HWLSSRLLDW AGYLFIAGML LFSGSLYLYA LLGTKWTGPI TPMGGVCFLV GWLLIALAVW
RNRVVELND