| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3465 |
|---|
| Symbol | |
|---|
| ID | 6117797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4238327 |
|---|
| End bp | 4241158 |
|---|
| Gene Length | 2832 bp |
|---|
| Protein Length | 943 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641635018 |
|---|
| Product | peptidase S9 prolyl oligopeptidase |
|---|
| Protein accession | YP_001761826 |
|---|
| Protein GI | 170727800 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000288116 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAGA CCTTGAAGTC ATTACCCATC GCATCTTTAT TGCTTGCTTC GGCAAGTTTA
GTCTCAGCTG GCTGTTATGC TGCTGCGTCA TCTCCATCAA ACCATAACCC AATGACAACT
AACGATATCA TGAAATTTGA ATCGTTAAAG AAACCTGTTA TTTCTGCAAA TGGTGCGGTA
CTCGCTGTCG AGGTCGCACC AGATAGGGGA GACAGTCATG GTTTAGTTCA GATGTTGGCC
TCACCTAAGA AGTTTACCCT TGATGGCGCC TCTAAGCCTC AAGTTAGCCG TGATGGCCGT
TTTGCTGCCT TTGTTGTTAA AACTTCGTTA CTTGAAAAGG CGACAGCGTC AGAGAAGGAG
AGAAAAAAGC TCAAGTCAGG CATGGTGTTA CTTGATACTG AAACCGGCAA GGAGACTCGC
TTTGAACGTG TTAAGGAGTT TAAGTTTAAT GAGTCAGGGA CACATCTTGC TGTTTGGTTT
GAGGCGAAAG AGAAAGATAA GAGCACTAAA GATAAATCTG AACCAGAGTC TGGTAAGAAA
GAGAATAAAG CTAAGGTTGA TAAATTTGAT AAAGGGAGTG AATTCAGGCT AATAGCACTA
GATAGTGGCG CAAGTCAGAA TATCGCCAAT GTCACTCGTT TCTATTTTGA TAAACTTGGT
AAGCACCTTG TTTTAGCGAG TAACAATATA GAAGCTAAGA AACATCAATT AGTATTAGTC
TCATTATCAA ATAATAAAAG AGAGGTTGTT CGCCAGTTCA ACAATCAGCA GATTGGTGAA
GTCTCCTTAA GTGAAGATGG CAAGTATATC GCCTTTACCC ATGGGGATAG TGAGCAAGCA
CCTTTTGGTC GTGAGTATCG ACTTTCGCTA TTGGATATCG CCAGTGGCGA AGTGAAAGCG
GCCCCCGTTT CGAAAGAGTG GAAGCTTAAT CGTTACAGCG AGCTTAGATT CTCACAGGAC
AGTGAACGTC TCTTTTTTGG CCGCGTCCCT CAGGTGAGTC AACAGTTAGC ATTGAGTAGA
ATTCTTAAGC AGGAAGATCT ATTTAATGAA AAGATCATTA CCGACCAGCG GAAGCTTAGA
GTTTGGCACG GTGATGATGC CCGCATTAAG CCTAATGAAA TTGAGCAGTA CAAGAAAGAG
ATAAAGCGTA CCTACCTTGC TGTTCTGCAC CTGAAAGGGA ATAACTTAGT GCAGCTTGCC
GATACTCAGG TACCTGATGT ATCACTACAG GAGCAGTCAC GGTATGTGCT GGGGAGTTCG
GATATTCCCT ATCGTAAGAT GATCACTTGG GCTGGCTTTT ATCGTGACTT CTACCTTATT
GACCTTAATA CTGGTCATAA AACTTCTATT CTCATTCAGC AGCCAAGTAA ACAGAAGCCC
AAGCTATCTC CAAATGAGCG CTTTGCTGTT TATTATCAGC AGGGTGACGT TTACCTGTAT
CAAATTTCTC AGGCACGTCG TCATAATCTG ACTAAAGGCT TAAAGGTGCC CTTTGCCGAC
GAAGATCATG ATTACCCATC CAATGCGCCA GGTTATGGCT TTGGTCCTTG GTTGGAAAAT
GATGCAGGTC TACTTATTTA CGATAAGTAC GATATTTGGC AGATGAATAC CGCATCCTTC
GAAGGCTTTA AGTTGACAGG TGGTAAAGGC CGCAAGCAGG GGATCCAGTA TCGCGTGACT
GGCTTGGTTG ATGATGAGAA TACCCCCGAT GTACTAAAGG CTAACCAAAG CCTCCTGTTG
CATGGTTATA ACGAAAAAAG TAAAGGTGAC GGCTACTACA AGGCTAAGTT AGGCACTTCG
GGTGTGACCA CCTTGATGGA AGGGGATTAT AAGCTAACAA CATTAGCGCG CAGCCAAGAT
GCAGAGACAA TTATCTTCTC GAAAGAGCGT TACGATCTCT TCCCTGATCT CTACAGTGCT
GAGTATTTAG CACCGCAAAA GGCGAAGCGC CAAACGGATC TGGATGCTCA AAAACAGCAG
TTTAACTGGA GTCAATCTGA GCTGGTACAC TGGACAAATG GCGATGGAAA GCCTCTTGAT
GGCGTGCTTA TTAAACCGAC TAACTATGTC GAAGGGCAAA AGTACCCAGT GCTTGTGTAC
TTCTATCGCT TTATGAGTGA CAGACTCAAC GCCTTTCCTC AGATGAAGCT CAACCACAGA
CCAAACTTTG CTTGGTATGC AGATAATGGC TATGCCATTT TCCTACCGGA TATCCGTTTT
GAAGTGGGAT ACCCAGGCGA AAGTTCAGTT CAGGCGCTCA CCTCTGGAGT ACAGAAAATC
ATTGAGATGG GAGTTGGCGA TCCTGATGCC ATTGGTATTC AAGGTCACTC ATGGGGAGGT
TATCAAACGG CCTTTGCTGT AACCCAGACT CATATCTTTA AGGCTGCAGT GACTGGTGCG
CCAGTATCAA ATATGACCAG TGCTTATAGT GGCATAAGGC ATGGTAGCGG CTTAGCTCGC
CAGTTCCAGT ATGAAACGGG GCAGAGTCGT ATTGGTGAGA GCTTGTTTAA GTCACCGCAG
AAGTATATCG AGAACTCTCC CATCTTTTAT GTTGAGCGTA TCAAGACACC TATGATGATC
ATGTTTGGTG ATAAAGATGA CGCGGTGCCG TGGGAGCAGG GCGTAGAGCT TTATCTTGCC
ATGCGCCGTG CGGGGAAAGA TGTGGTATTT TTGCAATACG AGAATGAGCC ACATCATCTG
AAGAAATACC CCAATAAGCT TGATTACAGC ATCCGTATGA TGGAGTATTT TGACCACTAC
CTTAAGGGAA AACCCGCACC AAAGTGGTTG ACTCAAGGTG AGGCATATAC TGAATATAAG
AAAGCGGATT AA
|
|---|
| Protein sequence | MRKTLKSLPI ASLLLASASL VSAGCYAAAS SPSNHNPMTT NDIMKFESLK KPVISANGAV
LAVEVAPDRG DSHGLVQMLA SPKKFTLDGA SKPQVSRDGR FAAFVVKTSL LEKATASEKE
RKKLKSGMVL LDTETGKETR FERVKEFKFN ESGTHLAVWF EAKEKDKSTK DKSEPESGKK
ENKAKVDKFD KGSEFRLIAL DSGASQNIAN VTRFYFDKLG KHLVLASNNI EAKKHQLVLV
SLSNNKREVV RQFNNQQIGE VSLSEDGKYI AFTHGDSEQA PFGREYRLSL LDIASGEVKA
APVSKEWKLN RYSELRFSQD SERLFFGRVP QVSQQLALSR ILKQEDLFNE KIITDQRKLR
VWHGDDARIK PNEIEQYKKE IKRTYLAVLH LKGNNLVQLA DTQVPDVSLQ EQSRYVLGSS
DIPYRKMITW AGFYRDFYLI DLNTGHKTSI LIQQPSKQKP KLSPNERFAV YYQQGDVYLY
QISQARRHNL TKGLKVPFAD EDHDYPSNAP GYGFGPWLEN DAGLLIYDKY DIWQMNTASF
EGFKLTGGKG RKQGIQYRVT GLVDDENTPD VLKANQSLLL HGYNEKSKGD GYYKAKLGTS
GVTTLMEGDY KLTTLARSQD AETIIFSKER YDLFPDLYSA EYLAPQKAKR QTDLDAQKQQ
FNWSQSELVH WTNGDGKPLD GVLIKPTNYV EGQKYPVLVY FYRFMSDRLN AFPQMKLNHR
PNFAWYADNG YAIFLPDIRF EVGYPGESSV QALTSGVQKI IEMGVGDPDA IGIQGHSWGG
YQTAFAVTQT HIFKAAVTGA PVSNMTSAYS GIRHGSGLAR QFQYETGQSR IGESLFKSPQ
KYIENSPIFY VERIKTPMMI MFGDKDDAVP WEQGVELYLA MRRAGKDVVF LQYENEPHHL
KKYPNKLDYS IRMMEYFDHY LKGKPAPKWL TQGEAYTEYK KAD
|
|---|
| |