| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3463 |
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| Symbol | |
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| ID | 6117795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4236906 |
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| End bp | 4237652 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641635016 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001761824 |
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| Protein GI | 170727798 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00045551 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAAAG TGGCATTGAT AACAGGCGGC GGCCGTGGCA TTGGCGCTGC GACAGCAAGG
TACCTTGCTG ATCACGGGTA TTCGGTTGGC GTTAACTACA AACAGAACAG TGAAACTGCT
GATGCTTTGG TGGCTCAACT GCAAGCTCAA GGTTGTCGAG CCCAAGCATT TCAGGCTGAT
GTGTCCGTCG AGTCAGAGGT AGTTGCTATG TTCCATGAGC TGGATCTGCA CTTAGGCAAG
ATCACGGCTC TGGTTAACAA TGCGGGCATT TTGCAGCCTC AGATGAAAGT TGTTGATATG
TCAGCCGAGC GTATTAATAG GATGTTGACC AATAATGTCA CTAGCTATTT TCTCTGCTGC
CGTGAGGCTG TAAAACGTAT GGCTCTGTCT AAAGGGGGCT ATGGAGGCGC AATAGTCAAT
GTCTCCTCAG TTGCATCAAG AGTTGGTGGT GCAGGGGAGT ATGTCGATTA TGCCGCTTCT
AAAGGTGCCG TCGATACTTT AACCATAGGT TTATCGTTAG AGGTTGCAGC CGATAGCATA
CGTGTTAATA GCGTTCGTCC TGGATTTATT CACACACAGA TGCATGCCGA TGGTGGTGAG
CCTGATAGGG TGAAGCGTCT TGCGCCTAAT ATCCCTATGA AACGAGGAGG GGAGCCCGAT
GAGGTCGCAG CGGCTATCGC TTGGTTGCTC TCTGATGAAG CCTCCTATGT GACAGGCACC
TTTGTCGATA TTGCGGGTGG ACGTTAG
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| Protein sequence | MEKVALITGG GRGIGAATAR YLADHGYSVG VNYKQNSETA DALVAQLQAQ GCRAQAFQAD
VSVESEVVAM FHELDLHLGK ITALVNNAGI LQPQMKVVDM SAERINRMLT NNVTSYFLCC
REAVKRMALS KGGYGGAIVN VSSVASRVGG AGEYVDYAAS KGAVDTLTIG LSLEVAADSI
RVNSVRPGFI HTQMHADGGE PDRVKRLAPN IPMKRGGEPD EVAAAIAWLL SDEASYVTGT
FVDIAGGR
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