| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3460 |
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| Symbol | xni |
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| ID | 6117792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4234722 |
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| End bp | 4235480 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641635014 |
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| Product | exonuclease IX |
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| Protein accession | YP_001761822 |
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| Protein GI | 170727796 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000245724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAATACTT TTTTAATCAT AGATGGCTTG AATTTAGTTC GACGCATCCA CGCAGCACAA
CCCAACGAAA ATGATGTTAA TGGTTTAGAT GCCCGTGTCG CTTCTGCCTG TAAAAAACTG
CTCAAATACC ACCAGCCAAG TCATGTCGCT ATCGTATGGG ACGGTGATGC CACCTCATGG
CGAAAGACTC TCTATGAAGA TTATAAAAAG GGGAGAAAAC CTATGCCTGA GGCATTGGCA
AAATCCCTCC CTGCATTAAA AACCCATCTA AGTGAGCTTA ATGTAAACTC AATTGATGCA
GAAGCTGAAG CCGATGATGT GATAGCAACG CTAGCCACTA AGCTAGTAAA TAATCAAGGA
AAAGCGATTA TCGTCTCCAC AGATAAGGGC TTTACCCAGT TAACTCATAC CAATATCGAG
CGATGGGATC ATTTTAATCA AGCTTACATC ACCATAGAGC AGAGAGAGGA GAAACTTGGC
GTCGAGCGAA CTCAATTTAT CGACTACTTA GCACTCGCCG GTGACAGTGG TAATAAAATT
CCTGGAGTAC CAGGTATAGG GCCAAAGTCA GCATCTGAGC TATTAAAAAT ATTTCGCTCT
CTATCTAACC TCTATGGCTC TTTAGAACAG GTTGGCGCCA AGCAAGCCAA AAAACTGGAA
GAGGGCAAGC AGATGGCTAG ATTGAGCTAT AAATTGGTAC AACTACAAAC AGAGATCCCA
TTAAATGCAA ATTTAAGTCA ATTCAGGCTT CCCCAGTAA
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| Protein sequence | MNTFLIIDGL NLVRRIHAAQ PNENDVNGLD ARVASACKKL LKYHQPSHVA IVWDGDATSW
RKTLYEDYKK GRKPMPEALA KSLPALKTHL SELNVNSIDA EAEADDVIAT LATKLVNNQG
KAIIVSTDKG FTQLTHTNIE RWDHFNQAYI TIEQREEKLG VERTQFIDYL ALAGDSGNKI
PGVPGIGPKS ASELLKIFRS LSNLYGSLEQ VGAKQAKKLE EGKQMARLSY KLVQLQTEIP
LNANLSQFRL PQ
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