| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3455 |
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| Symbol | rdgC |
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| ID | 6117787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4225734 |
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| End bp | 4226747 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635009 |
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| Product | recombination associated protein |
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| Protein accession | YP_001761817 |
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| Protein GI | 170727791 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2974] DNA recombination-dependent growth factor C |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0123115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000197991 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAATATG CATCGAACCT AAGGCAGGAT CATTATCTTT GCGGTTTACC CGAGCTCAGC
AATGGCTTAC ACTGCGCCTT TAATTTTGAT TGGGCGCTCA TTATGTGGTT TAAAAATCTG
ACTGTTTACC GTTTTAATAA ACCTTTCTCT GTCGATCCAG AAGCGCTTGA AAAGTCATTG
GAAGACTTCA CCTTCTCTCC ATGCTCAAGC CAGGACATCA GCAAATTTGG TTTCTCTAAT
GCCTTAGGCA AAAAAGGGAT CTCCTTGGTG CACAGTGCGA GCGGTCGCCA TCTGATCTGC
GCAACAAAAG AGGAGAAAAT CCTTCCTGGC CAAGTGATAA AGGAAGCCCT CGAAGATAAA
GTGGCGCAAA TCGAAGCTGA AGAGGACCGT AAACTGGCGA AAAAAGAGAA AGATGCCATG
AAGGAGGAGA TCATCATGAC TCTGCTTCCT CGTGCTTTCA CAAGACGTAG CCAGATACAC
GCATTGATCA TCCCTGAAAT TGAGATGATC CTCGTCGATA GCTCAAGTGC TGCTAAGTCT
GAAGAGCTAC TGGCACTACT TAGAAAAGCC CTAGGTTCTC TGCCAATTAT TCCATTGAGC
TTTAAGGCAC CTATCGAGTC TCAGCTCACA GATTGGGTGA AAAGCAATAG CACACCACAG
CCTTTCATTA TGCAAGATGA AGCTGAACTA AAGACCGATT CAGACGAAGG CGGGATTGTT
CGCTTTAAAC AGCAAAACTT AACCGAAGAT GAAGTACTGG CACATATTGA AGTGGGTAAG
CAAGTTCATA AACTCGCGCT TCACTTCGGT CAGTCTATCG CTTTCTTAAT GCAGTCTGAT
GCAGGAATTA AGCGTCTTAA GTTTTCTGAA GAGTTCAGAG CTGGCAATGA CGAGGTGGGA
ACTGAAGATC CTATGGCACG TTTAGATGCT GACTTTGCAT TGATGGGTAG TGAGCTTATC
GCACTAATGA ACTCATTAGT CGAAGTACTC GGTGGCGTAG AAGACACCAT TTAA
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| Protein sequence | MKYASNLRQD HYLCGLPELS NGLHCAFNFD WALIMWFKNL TVYRFNKPFS VDPEALEKSL
EDFTFSPCSS QDISKFGFSN ALGKKGISLV HSASGRHLIC ATKEEKILPG QVIKEALEDK
VAQIEAEEDR KLAKKEKDAM KEEIIMTLLP RAFTRRSQIH ALIIPEIEMI LVDSSSAAKS
EELLALLRKA LGSLPIIPLS FKAPIESQLT DWVKSNSTPQ PFIMQDEAEL KTDSDEGGIV
RFKQQNLTED EVLAHIEVGK QVHKLALHFG QSIAFLMQSD AGIKRLKFSE EFRAGNDEVG
TEDPMARLDA DFALMGSELI ALMNSLVEVL GGVEDTI
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