| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3449 |
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| Symbol | |
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| ID | 6117781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4219003 |
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| End bp | 4219881 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635004 |
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| Product | collagenase |
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| Protein accession | YP_001761812 |
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| Protein GI | 170727786 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.649774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000527325 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGTAT CTAACCTCCT CCCTATTGCC ACTTTACTCT CTCTTTATAC TTTTACTGCC
AATGCAGAAT CATCATCCCT TTCTGAAATC TTAACTCAGG AACATGCGTG CAGCGATACT
ATTCTTATCC GCTCTCAAGC TTTATCGCAA GCTCAAATAG CTCAAGCCTG TCAGTTATTG
AGTACTCAAG AAGCAAAATT TCATGCCCTA TTTGGCACTC GAGGAAAACC TGTAGCCAAT
GACAACAATG TCAGTATGAG AGCCAATGTC TATCACTCCC GCGAAGATTA TGTTCAATAT
GTGACCGCAC ATTTCGATGT TCCCAGCGAT AATGGTGGTA TGTTCCTCGA GGGCTTACCT
CACAAATTGA ATAACCAAGC TGAGTTTGTC GCCTACGAGA AAAAGGGCCA GATCTGGAAT
TTAGCTCACG AGTACGTGCA TTACCTCGAT GGACACTTCA ACCTCTACGG TGATTTTTGC
GCCTCACTCC ATGACTCCCA TAGCGCCCCT GAGTATTGCC CAAAACCTGC GCCACTTTTG
CCTCACCTCG TTTGGTGGAG TGAAGGACTA GGTGAATATA TCTCTCAAGG CGATAATAAT
GAGGCCGCCA TAAAATTAGC AAAAGACTCC TTAGCCAGCG AGACGAGTTA CCCACTGAGT
GAACTATTTA ATACCAGCTA TGAGATAAAT GGTGGTTCTG ACAGGGTCTA CCGCTGGGGA
TATTTAGCGG TTCGCTTTAT GATCGAGCAG CACAGAGACA AAATCGAGCA GATGCTAACC
TTTACTCGCA AAGGAGATTA CCCTAGGTAC CAAGCCTTGG TGAAACAGTG GGGAGCACAG
ATGGATGGTG AGTTTAAAGA TTGGCTCATA TCACTCTAA
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| Protein sequence | MKVSNLLPIA TLLSLYTFTA NAESSSLSEI LTQEHACSDT ILIRSQALSQ AQIAQACQLL
STQEAKFHAL FGTRGKPVAN DNNVSMRANV YHSREDYVQY VTAHFDVPSD NGGMFLEGLP
HKLNNQAEFV AYEKKGQIWN LAHEYVHYLD GHFNLYGDFC ASLHDSHSAP EYCPKPAPLL
PHLVWWSEGL GEYISQGDNN EAAIKLAKDS LASETSYPLS ELFNTSYEIN GGSDRVYRWG
YLAVRFMIEQ HRDKIEQMLT FTRKGDYPRY QALVKQWGAQ MDGEFKDWLI SL
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