| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3448 |
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| Symbol | |
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| ID | 6117780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4217060 |
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| End bp | 4218847 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635003 |
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| Product | peptidase M1 membrane alanine aminopeptidase |
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| Protein accession | YP_001761811 |
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| Protein GI | 170727785 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00063727 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTAAATG GATGGGATAA CAATCATGAT CACCACTCAT TCTCCAACGT AGAGAGAGTA
AGAGTCACGC ACCTTGAACT GGCATTGAAT GTTAATTTTC AAGCTAAACA GTTATCTGGT
GTCGCTTCTT TGGCGTTAGA TTATCTTGAT AAGAGTTGCC GGGAACTTTG GTTAGACCTA
AGAGAGTTGA CCATTATAGG TGTTGAGGAT GAAGAGGGCG CAGAGCTTAC CTTTGTTATT
GATAAAGAGG ACCCCATACT TGGTCAGCGT TTGAATATCT CTTTTACTTC AAAGCTAAAT
AAGGTCATCG TTCATTATGT CACCTCTCCT GATGCTGAGG GTTTGCAGTG GTTGAGTCCG
CTGCAGACCA GTGGTAAAAC TCTTCCGTTT CTTTTTAGCC AGTCACAACC TGTTAATGCC
AGAAGTTGGA TACCGTTACA AGACACGCCA AAAGCCAGAA TTACTTTTAA TGCCAAAGTG
AAAGCGCCAT CAGGCATGCG TGTTGTAATG AGTGCCATGA ATGACGCTGA GGCTAAGCTA
GATGGTGAGT TTGATTTTTC GATGGAAAAA CCCATTCCTA CGCATCTACT TGCTATCGCC
GTGGGGGATC TCGCTTTTGG CCCTATTGGC CCACGAACAG GAGTGTATGC TGAGCCAGAG
TTGTTAGAGG CCGCCGTTAA AGAGTTTGAG GATACAGAGG AGATGGTTGT TACAGCTGAA
TCTCTTCTTG GTCCATACCC TTGGGGGCGA TATGACATGC TGGTGTTGCC ACCTAGTTTC
CCCTTTGGCG GCATGGAGAA TCCTAGGCTC GCCTTTATGA CGCCAACACT CATTGCTGGT
GATAAGAGCC TGGTTTCGAC CGTTGCTCAT GAGTTGGCTC ACTCCTGGAC GGGTAACTTA
GTCAGTAATG CAACTTGGCG AGATCTCTGG CTGAATGAAG GGTTCACAAC CTATTTTACC
AATCGAATTG TCGAAGCCGT GTTTGGTAAA GAGCAAGCTG AGCTTGAGGT CGTCCTGGAG
TATGGGCGCT TAAAGGAGGA GTTAGCGACC ACTGCATTTG CGGAGCAAAA CTTACCGGCA
AACGTGCAGA AACAAGATCC TAATGAAGCA TTTAACCGCT TTACGTATGA CAAGGCCTCT
ATGTTTGTTC ATGATCTTGA AAAACGTATT GGTCGTGAGG CGTTTGATAA GTTTCTTTTT
ACCTATGTAG AGCATTTTGC GTTTGAAGCG ATCACCACAG AGCGCTTTAT TGATTATGCT
AAGCAAACCT TACTAATTGA GCATGCAGAT AAGATATCTG AGGCTGAATT AAATGAGTGG
GTGTATGGCT GTGGTATGCC GAGCTGTTTT ACGGCGCCGC AATCAGATAG TTTAGATAAA
GTGGATCTTG CTCTTTCACT CTGGGCTAAA GGGGCTTGTG CAGAGTCGCT AGAGACAGAG
GCTTGGCGTG TTCATCACTG GCAATACTTT CTCAATAGCT TACCTGAGGT TCAAAAACAG
TCCCAACTGA TGGATCTCGA TAATCATTTT AAGCTGACAG ATTCAACCAA TGCAGAGATT
GCTTGTGACT GGTTTAGGGT TGCGATACGT AATCATTATG ATCCGGTTTT ACCTGCCTTA
AGTGATTATC TGATCCGTAT CGGTAGGGGG AAGTTTGTAA AGCCTTTGTT TACCGAGTTA
CAAGTTGCTG GTTATGAAAG CGAGATGAAA GAGATCTATC GTGAAGCGAG AAAAGGTTAC
CACCCTTCGA TTGTGACTCA GCTAGATAAA CTTCTGAGCT TCAGTTAA
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| Protein sequence | MLNGWDNNHD HHSFSNVERV RVTHLELALN VNFQAKQLSG VASLALDYLD KSCRELWLDL
RELTIIGVED EEGAELTFVI DKEDPILGQR LNISFTSKLN KVIVHYVTSP DAEGLQWLSP
LQTSGKTLPF LFSQSQPVNA RSWIPLQDTP KARITFNAKV KAPSGMRVVM SAMNDAEAKL
DGEFDFSMEK PIPTHLLAIA VGDLAFGPIG PRTGVYAEPE LLEAAVKEFE DTEEMVVTAE
SLLGPYPWGR YDMLVLPPSF PFGGMENPRL AFMTPTLIAG DKSLVSTVAH ELAHSWTGNL
VSNATWRDLW LNEGFTTYFT NRIVEAVFGK EQAELEVVLE YGRLKEELAT TAFAEQNLPA
NVQKQDPNEA FNRFTYDKAS MFVHDLEKRI GREAFDKFLF TYVEHFAFEA ITTERFIDYA
KQTLLIEHAD KISEAELNEW VYGCGMPSCF TAPQSDSLDK VDLALSLWAK GACAESLETE
AWRVHHWQYF LNSLPEVQKQ SQLMDLDNHF KLTDSTNAEI ACDWFRVAIR NHYDPVLPAL
SDYLIRIGRG KFVKPLFTEL QVAGYESEMK EIYREARKGY HPSIVTQLDK LLSFS
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