| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3431 |
|---|
| Symbol | |
|---|
| ID | 6117763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4198468 |
|---|
| End bp | 4200291 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641634986 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_001761794 |
|---|
| Protein GI | 170727768 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAT CAAAAATTGC GGGAGCGATT ATTGCCCTGA CAGTGAGTGT ATCAACGACC
GCAACAGCAG ATGACAATCG TTACATTATT CAAGTAGACA ACGGCAATAA AGGCGTTGTT
AAGGCCTTAG CAAACAGACT TGGCGCTGAG ATCCACCTTG ATGGTAATGG TTTTATTTCG
GCAACATTTG CTGGTAAAGA CCTATCTCAA GTAAAAGGTT TATTGAATAA CCCACATATT
AAGCTTGTAG AAGCGGATCA GCGTCGTCAT TTGATGTCTG CATACAGTGA TGATGCGGGC
AACCCAATGA CACAGCAAGT GACCCCTTAT GCTGTTTACC AATCTCAAGC AGACCAAGTT
GCGTTTAACG CAAGTGCAGG CATGAAGGTT TGTGTTATCG ACTCTGGTCT AGATGCGAGC
AATACAGATT TTGAGTGGAA TAATATCTCT GGTGATAATG ATTCTGGCAC AGGCAACTGG
AATGAGAACG GTGGACCACA CGGTACACAC GTTGCTGGTA CCATTGGTGC AGCTGATAAC
AGTGTTGGTG TGGTTGGTAT GGCACCTGGC GTGGATATGC ATATTATCAA GGTATTTAAT
GCTGACGGCT GGGGTTACTC TTCAGATCTT GCTCATGCTG CAGACCTATG TAGTGCAGCT
GGCGCAAATA TTATCAGCAT GAGTCTAGGT GGTGGTGGTT CTAACTCTAC TGAATCCAAT
GCGTTTCAAT CTTTTGTTGA TGCTGGCGGT TTAGTGGTTG CCGCCGCGGG TAATGACGGT
AATAACGTAC GTTCATACCC GGCAGGCTAT CCATCAGTAA TGATGATTGG CGCTAACGAT
GCCGATAATA ATATTGCTGA CTTTTCTCAA TTCCCTTCAT GTACTTCAGG TCGCGGTAAG
CGAGCGACCA CAGATGAGAC TATCTGTGTT GAAGTGACCG CGGGTGGTGT AGACACTTTA
TCAACGTACC CAGCGGGTAT GGCAACAGCA TCAAATATGT CTGCTGATGG CGCTGCATAC
GCAAGCTCTG CAATGGAAAA CTCAGGTGCG ATTGCTGGTG GTACTTACTA TATGGGCACA
GCTGAAGCTA CCGATAGCGG TGCAAACGGT AATATCTGTG TTATTGACCG TGGCGTGATC
TCTTTCCACG ATAAAGTGGC AAACTGTGAA AGCTCAGGTG GTGTTGGCGC TGTTATTATC
AATAACGAAG CGGGTATGTT GTTCGGTACT TTAGGTGATA CAAATACAAC GACTATCCCA
GCAGTTGGTG CGGCATTTGA AGACAGAGCG GCAATTGTTG CAGCATCTAA TATCAGCATC
GATATTGGCA CGTCAGATTA TGGTTTCATG AGTGGTACCT CTATGGCAAC CCCTGCGGTA
TCGGGTGTAG CTGCACTGGT TTGGTCTAAC CATAACCAAT GTACAGGTAG TGAAATTCGT
GAAGCACTTA AAGCAACTGC AATGGACAGT GGCGCGGCGG GTAATGATGT TTACTTCGGT
TACGGTATCG TAAAAGCGGC AGCAGCGGAT GCTTATTTAA CTGCTAATGG TTGTGCTGGT
GACGGCGGTG GAGAACCTGG TGGTGATTTC GCGCTAACGG CCGACGGTTA TAAGAGCAAA
GGTGTTAAGA AAGTTGACCT GACGGTTAAT GGTGCTGCTG GCAGTAATGT TGACCTTTAT
CGCGATGGCA GCAAGATTGC GACGACATCA GCAAGCTCAA CTTATACCGA TACTATTTCA
GGCAAAGGTG GCGGAACCTT CACTTACAAG GCATGTGATG AAGGCACCAC AACTTGTACC
GCTGAGCAAA CTGTTGTCTT TTAA
|
|---|
| Protein sequence | MKLSKIAGAI IALTVSVSTT ATADDNRYII QVDNGNKGVV KALANRLGAE IHLDGNGFIS
ATFAGKDLSQ VKGLLNNPHI KLVEADQRRH LMSAYSDDAG NPMTQQVTPY AVYQSQADQV
AFNASAGMKV CVIDSGLDAS NTDFEWNNIS GDNDSGTGNW NENGGPHGTH VAGTIGAADN
SVGVVGMAPG VDMHIIKVFN ADGWGYSSDL AHAADLCSAA GANIISMSLG GGGSNSTESN
AFQSFVDAGG LVVAAAGNDG NNVRSYPAGY PSVMMIGAND ADNNIADFSQ FPSCTSGRGK
RATTDETICV EVTAGGVDTL STYPAGMATA SNMSADGAAY ASSAMENSGA IAGGTYYMGT
AEATDSGANG NICVIDRGVI SFHDKVANCE SSGGVGAVII NNEAGMLFGT LGDTNTTTIP
AVGAAFEDRA AIVAASNISI DIGTSDYGFM SGTSMATPAV SGVAALVWSN HNQCTGSEIR
EALKATAMDS GAAGNDVYFG YGIVKAAAAD AYLTANGCAG DGGGEPGGDF ALTADGYKSK
GVKKVDLTVN GAAGSNVDLY RDGSKIATTS ASSTYTDTIS GKGGGTFTYK ACDEGTTTCT
AEQTVVF
|
|---|
| |