| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3416 |
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| Symbol | |
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| ID | 6117748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4178930 |
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| End bp | 4181041 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634971 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001761779 |
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| Protein GI | 170727753 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCT TAAACTCTGC CTTACGAAAG CCTCATCTAC TGCCGCTGCT TGCCACCCTG
ATTGCCACTC CAAGCTTAGC TAGCGACACG GATGTGAGTA ATACGGTGAA CTATTCAACC
GATGTGATAT ATCAGATAGT CACCGACCGT TTTCTAGACG GGGATAGCGG TAATAACCCG
CCACCAGCCA TGTTAGATAG CAGTTGTAGC AACCTAAAAA AATATTGTGG TGGTGATTGG
CAGGGGATCA TAGATAAACT CAACGATGGG TATTTTAGCG ATATGGGGAT CACCGCATTG
TGGATCTCTC AGCCCGTCGA AAATATTCAC GGTGTGCTCA ATGACGCCCA AGGAAGCACC
TCCTATCATG CTTACTGGGC CAGAGACTTT AAGCGAACCA ACCCCTACTT TGGTACTTTC
AACAGGTTCG ATACCTTAAT CCAAACCGCA CATAACTTAG GGATTAAGAT CATTATCGAT
TTTGCCCCCA ACCACAGCTC ACCCGCTTCC AGTGATGACA GCAGTTATGC TGAAAATGGC
CGACTCTATA ATGATGGCGT CTTGATGGGC GGCTATAGTA ATGATTCTGC CAACTTGTTT
CACCACAACG GCGGTACCGA TTTTTCAACC ATTGAAGATG GCATCTATCG CAATCTCTTC
GACTTAGCCG ACTTTAATCA TGAAAACCAA CAGATGGGTC AGTATCTACA GGAGGCTATT
GCCCTGTGGT TAGATAAGGG CGTCGATGGG ATCCGCGTGG ATGCAGTCAA GCATATGCCC
TTAGGCTGGC AGAAGAAGTG GATGAGCGCC ATCTACAAAC ATAAACCCGT ATTTAGTTTC
GGGGAGTGGT TTTTGGGCAG CAATGAGGTT GATCCCGCTA ACCATGATTT TGCCAACAAT
AGCGGCATGA GTCTGCTGGA CTTTCAGTTT GCACAAACCA CCCGTAAAGT GTTCCGCGAT
CAAACTGCCG ATATGCGTGC ACTGGATCAG ATGATACAGG CAACATCCTC AAGCTATCAG
GAGGTAATCG ATCAAGTCAC CTTTATCGAC AATCACGATA TGGACAGGTT CCAGCAAACA
GGCGTCAATC AACGCCGCAT CGAGCAGGCC CTTGCCTTCA CGCTAACTTC ACGTGGCGTT
CCAGGGATCT ACTACGGCAC CGAGCAATAC CTAACTGGCA ACGGCGATCC TGATAATCGC
GCAATGATGC CAAACTTTAA TCAAACCACC ACAGCCTACA ATGTGATAAA AGCCCTAGCG
CCTCTGCGCA AGTCTAATCC AGCACTGGCT TATGGCGATA CTCAGGAGCG CTGGTCAAAC
TCAGATGTCT ATGTTTATGA ACGTCAATTT GGCAGTAGTG TGGTTCTGGT TGCCATCAAT
CGCAGCAGTA GCCAATCCTA TAATTTAACA GGCCTCTTCG CCGCATTGCC TCAAGGAAAC
TACCCAGATA TCCTCTCAGG TAAACTCAAT GGTAACAGTA TCGACGTCTC AGCCAATGGC
GCCGTCACTC CATTCAACTT AAGCAGTGGA GAGGTCGGAG TTTGGCAGTA TACCGCCAGT
GAAACTCAAC CAAAACTTGG CCATGTAGGC CCAATGATGG CAGCGCCTGG AGATACCCTC
ACCTTAGATG GACGAGGATT TGGCAACACA GGAGCGGTTC AAGTTGGAGC CACAAATGCA
CAGGTTCTTA GCTGGTCCGA CACACAAGTA AAAATCCAGA TCCCGACTAT CTCTGCAGGC
ACTTACTCAG TCAAGCTCAC CACATCAAAC GGACAGAGCA GCTATCCAGA TCTAGATGTA
CTTACTGGAC CGCAAAAGTC GGTACGTTTT ATTCTGGAAA ATGGTTACAC CCAATGGGGG
GAAGCAATCT ACCTTGTAGG TAATACCCCA GAGCTTGGTA GCTGGGATCC CAACAAAGCT
ATCGGCCCCT TCTATAACCA AGTTGTTGAG CAGTACCCGA ACTGGTATCA AGATGTCAGC
GTTCCGACAA ACACCCAACT GCAATTTAAG TTTATTAAGA AAAATGGCAA TCAGGTGATT
TGGGAGAGCG GCAGTAACCA TCAGCTCAGC GCAGGGTCTA CCGACTCTAG TATCAGGGTT
AATTGGCAGT AG
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| Protein sequence | MTRLNSALRK PHLLPLLATL IATPSLASDT DVSNTVNYST DVIYQIVTDR FLDGDSGNNP
PPAMLDSSCS NLKKYCGGDW QGIIDKLNDG YFSDMGITAL WISQPVENIH GVLNDAQGST
SYHAYWARDF KRTNPYFGTF NRFDTLIQTA HNLGIKIIID FAPNHSSPAS SDDSSYAENG
RLYNDGVLMG GYSNDSANLF HHNGGTDFST IEDGIYRNLF DLADFNHENQ QMGQYLQEAI
ALWLDKGVDG IRVDAVKHMP LGWQKKWMSA IYKHKPVFSF GEWFLGSNEV DPANHDFANN
SGMSLLDFQF AQTTRKVFRD QTADMRALDQ MIQATSSSYQ EVIDQVTFID NHDMDRFQQT
GVNQRRIEQA LAFTLTSRGV PGIYYGTEQY LTGNGDPDNR AMMPNFNQTT TAYNVIKALA
PLRKSNPALA YGDTQERWSN SDVYVYERQF GSSVVLVAIN RSSSQSYNLT GLFAALPQGN
YPDILSGKLN GNSIDVSANG AVTPFNLSSG EVGVWQYTAS ETQPKLGHVG PMMAAPGDTL
TLDGRGFGNT GAVQVGATNA QVLSWSDTQV KIQIPTISAG TYSVKLTTSN GQSSYPDLDV
LTGPQKSVRF ILENGYTQWG EAIYLVGNTP ELGSWDPNKA IGPFYNQVVE QYPNWYQDVS
VPTNTQLQFK FIKKNGNQVI WESGSNHQLS AGSTDSSIRV NWQ
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