Gene Swoo_3410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3410 
Symbol 
ID6117742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4171140 
End bp4171973 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content41% 
IMG OID641634965 
Producthypothetical protein 
Protein accessionYP_001761773 
Protein GI170727747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTATA AACAACCGCT AGCCATGACC CTCTTATCTC TGGCTGTTAG TAGCAGTTGC 
TTTGCAGCAG ATTATCAAAA CGTCAAGGAT ATCCCATTTA AGGACAGCAA TTTTAAAGCC
TGTGTACTAG CACAAACAAC TGAAGATCCT GCCGCCATCA CTAAGCTTAT ATGCCGTCAG
ATGAAGATTA ATCAAGTGGA TGAACTGAGC CACTTTCCAG CACTCGAGAG ACTGTGGATA
TCGGGGCCAC AACTGAAAGA AGTAGATCTC AGTGGCAATC TAAAACTCAC TGAACTTTCC
ATCACCAAAG GGAAGTTGAC TCAATTGGAT CTGAGTAAAA ACTCCCAACT GCAGGAGCTC
AATATCAGCT TTAATCAAAT CTCCGACTTA GATCTAACCC ACAACCCTAA ACTGACAGAT
ATCTCTGTTG TAGCGAATAG ATTAACAGAG TTAGATTTGA GCCAGAACTC AGCACTTAAG
TATCTATGGG CAAAAGAGAA TCAGTTTACC TCTCTCGATT TTAGTCATAA TTCAGCACTG
GTGCAGGTTG GCCTAACTAG CAACCAAATA TCTACAATAG ATGTGAGTAA AAACAGCGAG
CTAAACCGTT TAGGCTTGAT GTATAACCAG TTAACTAAGC TAGATGTTAG TTATAATTCT
AAGCTGACAA AGCTCTACCT GACTGACAAC AAGTTGACCC ATATTGATAT CAGTCAAAAT
CCTAAACTCA GAGATCTCTG GGCCACGGGA AATCCCCTAG AGCAACTGGA TATCAGCAAG
AACCCAAAGC TAGATGATTA TGAAGTTGAC GAAGGGATTA AAATTAGCGA ATAG
 
Protein sequence
MDYKQPLAMT LLSLAVSSSC FAADYQNVKD IPFKDSNFKA CVLAQTTEDP AAITKLICRQ 
MKINQVDELS HFPALERLWI SGPQLKEVDL SGNLKLTELS ITKGKLTQLD LSKNSQLQEL
NISFNQISDL DLTHNPKLTD ISVVANRLTE LDLSQNSALK YLWAKENQFT SLDFSHNSAL
VQVGLTSNQI STIDVSKNSE LNRLGLMYNQ LTKLDVSYNS KLTKLYLTDN KLTHIDISQN
PKLRDLWATG NPLEQLDISK NPKLDDYEVD EGIKISE