| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3404 |
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| Symbol | |
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| ID | 6117736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4163359 |
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| End bp | 4164573 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634959 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit B |
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| Protein accession | YP_001761767 |
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| Protein GI | 170727741 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB |
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| TIGRFAM ID | [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.240322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAA AAGATAATAA GCCAGATCTA CAGGAAGACT ATTACGCTCC AGGTCAGGCG
ATGAAGGGTT ATCTTAGATC CCTTGTTATT GCTCATGGTC GCAGCACTAA AGGTAAGGTG
CACGTTCGTG ATGCTATCGA TGTAAAACGT ACCATGACCA TGGTTGGTTT ATGTTTACTG
CCAGCGATTC TGTTTGGCTT GTATAACTTA GGGTTACAGG CGCAGCTTGC GATCGCCTCT
GGTTTATCAA CACCAGATGT GTGGCAACTG GGCCTATTTA ACCTTATCTC TGGCGGATTA
ACGGAGCAGA CAGGGTTAAT TGGTCTATTC CTTTACGGCT TGAGTTTCTA CTTTCCTATC
TATCTGACTG CGCTGCTGGT GAGTCTTTTC TGGGAGGTGG TATTTGCTAA GGTGCGTGGT
CAAGAGCTCC ATGAAGGCTT CTTTGTGACC GCACTGCTGT TCACCTTAAT CTTGCCTGTC
TCGACACCGC TTTGGATTGT AGCCATGGGT ATCACCTTTG GTGTGGTGAT AGCCAAAGAG
CTGTTTGGTG GCATGGGGTA TAACTTCCTC AACCCTGCGC TTGCTGGTCT CTCATTTATC
TTCTTTGCCT ATCCGAGTGA AGTGGCGAGT GTTGGCCAGT TGGTAGCTGT CGACGGTTTC
TCTGGTGCAA CAGCACTGGC TCAAACCGCA GCCGGTAAGT TGAGTTTTGC CGAGTACGCT
TGGTTTGATG CTTTTAGCGA TCCTAACTGG TGGAATGCTT TCTTAGGCTT TATACCTGGT
GCAATTGGTG AAACCAGTAC CTTAGCACTC TTGATTGGTG GTGGATTACT GCTATTAAGC
CGCTTAGCCG ACTGGCGTAT CGTGGCTGGC GTGATGCTGG GCATGATCTT GACTGCCATC
ATGTTTAACT TGATTGGCTC TGCGAAAAAT GAGCTATTTG CGATGCCGTG GACCTGGCAT
CTCGTCACTG GCGGTTTTGC GCTGGGTATG ATGTTTATGG CCACAGATCC TGTGACGACC
TCGTACACAC GTAAAGGCAA AATTGCCTAC GGCTTCCTTA TCGGCTTTAT GACGGTGCTT
ATCCGCGTGG TCAACCCAAA GATGTCAGAG GGAATAATGT TAGCCATCCT ATTCGCTAAC
TTGTGGGCAC CTATCTTCGA CTACCTCGTT GCGAAAGCGA ATATCAAACG GAGGGTGAAA
CGCAATGCCC TTTAA
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| Protein sequence | MNSKDNKPDL QEDYYAPGQA MKGYLRSLVI AHGRSTKGKV HVRDAIDVKR TMTMVGLCLL
PAILFGLYNL GLQAQLAIAS GLSTPDVWQL GLFNLISGGL TEQTGLIGLF LYGLSFYFPI
YLTALLVSLF WEVVFAKVRG QELHEGFFVT ALLFTLILPV STPLWIVAMG ITFGVVIAKE
LFGGMGYNFL NPALAGLSFI FFAYPSEVAS VGQLVAVDGF SGATALAQTA AGKLSFAEYA
WFDAFSDPNW WNAFLGFIPG AIGETSTLAL LIGGGLLLLS RLADWRIVAG VMLGMILTAI
MFNLIGSAKN ELFAMPWTWH LVTGGFALGM MFMATDPVTT SYTRKGKIAY GFLIGFMTVL
IRVVNPKMSE GIMLAILFAN LWAPIFDYLV AKANIKRRVK RNAL
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