| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3402 |
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| Symbol | |
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| ID | 6117734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4161834 |
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| End bp | 4162457 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634957 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_001761765 |
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| Protein GI | 170727739 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.223609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTACTC ATACATTATC GACTCGCGAT ATATTGACTA ACCCAGTTTT CACCAATAAC
CCAGTAGCGA TGCAAGTGCT AGGTGTCTGT TCTGCCTTGG CGGTCAGTAA CTCGTTGCAA
ACAGCTTTGG TGATGACGTT AGCTGTGACC TTCGTATTGG TGTTCTCTAA CCTGATCATC
TCCTCTATAC GTCGTTTGAT CCCAAACAGT GTGCGTATTA TTGCTCAGAT GACTGTGATT
GCCTCCTTGG TGATCATTGT CGATATGGTT TTGCAGGATG TGGCTTATGA GTTATCTCGT
CAGCTGTCAG TGTTTGTAGG CCTTATTATT ACTAACTGCA TCATTATGGG CCGCGCTGAA
GCCTTTGCCA TGAAGAACCC ACCACACTTA GCTGTGGTTG ATGCCTTTGG TAATGCCATA
GGTTATGGCG TGATCTTGCT CGGTGTTGCC TTTGTGCGTG AGCTACTTGG CAGCGGCACC
CTGTTTGGTC ATGAGGTACT GCAAACCGTT GAAAATGGCG GCTGGTACCT CGCAAACGAG
ATGTTCAAAC TCCCCCCTAG TGCGTTTTTC CTCATTGGAT TAATGATCTG GTCCATTAAC
GTTATTCAGC GTAAACGAGG TTAA
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| Protein sequence | MSTHTLSTRD ILTNPVFTNN PVAMQVLGVC SALAVSNSLQ TALVMTLAVT FVLVFSNLII
SSIRRLIPNS VRIIAQMTVI ASLVIIVDMV LQDVAYELSR QLSVFVGLII TNCIIMGRAE
AFAMKNPPHL AVVDAFGNAI GYGVILLGVA FVRELLGSGT LFGHEVLQTV ENGGWYLANE
MFKLPPSAFF LIGLMIWSIN VIQRKRG
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