| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3400 |
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| Symbol | |
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| ID | 6117732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4159940 |
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| End bp | 4161157 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634955 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit F |
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| Protein accession | YP_001761763 |
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| Protein GI | 170727737 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.541196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATGG CAATTGGTAT CGGCATGTTC ACCTTCGTTG TGAGTGTGTT GGTTATGGTG
ATTTTAATCG CCAAAAGTAA ACTGGTCTCC ACGGGAGATG TCTCTATTCG CATCAATGAT
GACGATGAGA AAAGCATTAC CACCTCGGCA GGTGACAAGC TATTAGGGGC TTTGGCAAAC
AAGGATATCT TTATCCCGTC GGCCTGTGGT GGCGGTGGTA CATGTGGTCA ATGTCGTGTG
GTAGTGAAAT CTGGTGGCGG TGATATTTTG CCAACAGAGC GTGATCATAT CACTAAGAAA
GAGGCCAAAG AGGGTTGTCG TCTGGCGTGT CAGGTTGCGG TTAAAACCGA CATGGAACTT
GAAGTTGAAG ATGAGATCTT CGGCGTGAAG AAGTGGCAAT GTGAAGTTAT CTCTAACGAT
AACAAGGCGA CCTTTATTAA AGAGCTACTG CTTAAGCTAC CAGAAGGGGA AGATGTTAAG
TTTAAGGCTG GTGGTTACAT TCAGATTGAG GCACCAGCCC ATCAGGTGAA CTACAGTGAT
TTTGATATTC CTGAGGAGTA TCGTGGTGAC TGGGAGAAGT ATGAGCTGTT TAATCTGGTA
TCAAAAGTTG ATGAAGATGT ACTGCGTGCA TACTCAATGG CGAACTACCC AGATGAGAAG
GGTCGCATTA TGCTTAATGT GCGTATCGCA ACGCCTCCCT CTGAAGGGCT ACCACCTGGC
AAGATGTCAT CTTACATCTT TAACCTAAAA GCGGGTGACA AGGTCACTAT TTCTGGACCG
TTTGGTGAGT TCTTCGTTAA AGATACCGAT GCTGAGATGG TCTTTATCGG TGGTGGTGCT
GGTATGGCGC CGATGCGTTC TCATATCTTT AACCAGCTTA AAGGAGAGAA AACCCAGCGT
AAGATGAGTT TTTGGTACGG TGCACGCTCA ACGCGTGAAG TTTTCTATCA AGAAGATTTC
GATAAGTTAG CGGCTGAGAA TGATAACTTT GTTTGGCATG TTGCTCTCTC AGATCCACTG
CCTGAGGATA ACTGGGATGG CTATACTGGC TTTATCCATA ATGTCCTGTA TGAGAACTAC
CTCAAAAACC ATAAAGCGCC GGAAGATTGT GAGTTTTACA TGTGTGGACC TCCAATTATG
AACTCTTCAG TGATTAGCAT GCTAGAAAGT CTTGGTGTCG AAGAGGAAAA TATCCTACTA
GATGACTTTG GTGACTAG
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| Protein sequence | MEMAIGIGMF TFVVSVLVMV ILIAKSKLVS TGDVSIRIND DDEKSITTSA GDKLLGALAN
KDIFIPSACG GGGTCGQCRV VVKSGGGDIL PTERDHITKK EAKEGCRLAC QVAVKTDMEL
EVEDEIFGVK KWQCEVISND NKATFIKELL LKLPEGEDVK FKAGGYIQIE APAHQVNYSD
FDIPEEYRGD WEKYELFNLV SKVDEDVLRA YSMANYPDEK GRIMLNVRIA TPPSEGLPPG
KMSSYIFNLK AGDKVTISGP FGEFFVKDTD AEMVFIGGGA GMAPMRSHIF NQLKGEKTQR
KMSFWYGARS TREVFYQEDF DKLAAENDNF VWHVALSDPL PEDNWDGYTG FIHNVLYENY
LKNHKAPEDC EFYMCGPPIM NSSVISMLES LGVEEENILL DDFGD
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