Gene Swoo_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3398 
Symbol 
ID6117730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4157655 
End bp4158155 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content46% 
IMG OID641634953 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001761761 
Protein GI170727735 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTATTG CTGAAACTGA ACGACTCATA CTGCGCCGCT TCACTGCGGA GGATAAGCAG 
GCAGTTTTTC TTTTAAATAG CATACCTGAG ATATTAACCT ATATCCCAGG AGAGCCAATG
TCGTCGGTTA CTCAAGCCGA GCAGATATTA AATGAGCTGG TGTTCCCAGG TTACGAGAAG
TTTGGCTTTG GACGATGGGC GGTTGAGCAT AAAGCTGATA ACAAGGTTAT TGGCTTTTGC
GGGCCTACCT TTGTTCAAGA GTATAACGAG GTCGAGCTAG GTTATCGTTA TCTGCCTGAT
TACTGGGGCA CAGGAATAGG GTTTGAAGCC GCTCAAGCCG CCTTAACCAA GATCCCTAGT
TTTGATATAG ACCATGTGAT TGCACTCATT CTTCTGGGCA ACAGAGGCTC TGAAGCACTT
GCCAGAAAAG TCGGTATGAC GGAGCGTGAA CGCAACACGT TTATGGGGCA CAAGGTTAAC
GTTTTTCATA AGTCACTTTA A
 
Protein sequence
MIIAETERLI LRRFTAEDKQ AVFLLNSIPE ILTYIPGEPM SSVTQAEQIL NELVFPGYEK 
FGFGRWAVEH KADNKVIGFC GPTFVQEYNE VELGYRYLPD YWGTGIGFEA AQAALTKIPS
FDIDHVIALI LLGNRGSEAL ARKVGMTERE RNTFMGHKVN VFHKSL