| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3397 |
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| Symbol | |
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| ID | 6117729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4156034 |
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| End bp | 4157353 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634952 |
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| Product | coproporphyrinogen dehydrogenase |
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| Protein accession | YP_001761760 |
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| Protein GI | 170727734 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACT CACGCTTAAA TACACGCTTA TTGCTTGCTA CAGACAGTTT AGATTGGGTG
ATGAACCGCA CAATAAAGCA GTCGCTTTCT TTGAAAAATG CGACGCCGTT GAGTGTGGAG
AGCGATGAAA ACGCTATCCC ATCTAAGCCG ATAGAGACCT TGTATATACA TATCCCTTTT
TGCCATACCC TATGTCGTTT TTGCTCTTTC CATAAGGTTA AATTCAGTGA GCCATTAGCC
AGAGAGTATT TTGTCGCGCT TAGGCAGGAG ATCCGTGAGG TGATCGCCAA GGGTTACCGT
TTTAATCGCG TCTATATTGG TGGTGGCACC ACCACAATAC TGGAAGATGA GCTGATTAAG
ACCATAGAGA TGATCAAGGG GCTGACTCCC ATCCGTGAAG TCTCCTGTGA AAGCGATCCT
ATCTACTTTA AGGAGGGAAA CCCTCAACTT CTTAATGGCT TGGTCGATCG TATGTCCATT
GGAGTGCAGA GCTTCGATGA TAAGATTTTA AAAGCAAGTG GACGTTTTGA GAAGTTTGGT
TCGGGTCTGG AACAGGCTGA CTATGTTGCT CGGGCGATTG CGCTTATCCC CACGGTAAAT
CTGGATATGA TGTATGGGTT TAAAACACAG ACCCCTGAGT CTGTGCACTG GGATTTAAAG
CAAACGTTAA GATTGAAACC AGATCAAATT ACCACCTATC CACTGACCAT AGGGATAGGT
AAAAACCGTA AGAAAGCAGG CTCCCTTGCT GGAGACCCAC ACGCTTTATG GCCACAATTT
TTGGCTGTGA AAAAGGCGTT AAGTGGGCGC TATTTGATGG AGTTTCCCTG GACCTTTAGT
CGTAACTTCG GCCAAGCTGT TGAAAATAAA TACGTACTCG ATGGTGAAGA TTGTTTTGGT
GTTGGTTCGG GAGCTTTTGG CCGATTTGGT GAGCAATTTA GGATCTCAAG CTTCGATATT
CAAGATTATA TTCAGCTGAT AAAACAGCAG CAAAGTGGTA CTTGCTACAC TAAGCAGATA
GAGAGTAGTG CGCTACTGCA GCACCATTTG ATGATTATGA TGGGTCATGG CCGCCTCGAT
AACTCGGTTT TTTACCAGCA TACAGGCAAA ACCTTATGGC AAGCTTTTCC CTTAGAGATG
AGTTACTTGA TTGGTGCTGG AGCGATCAAA AAAGATGGTA GTCAGTATGT GACCACAGAG
CAGGGGCAGT TTATCGGCCT TAAGATGTTT ACGGGCTTCC TCTCTGGGAT GGATTACTTG
AGAGAGCAGG CAAGAGACCT TCCCTTAATG CATCAAGAGT TGAGTGCCGA GATAGTATAA
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| Protein sequence | MKDSRLNTRL LLATDSLDWV MNRTIKQSLS LKNATPLSVE SDENAIPSKP IETLYIHIPF
CHTLCRFCSF HKVKFSEPLA REYFVALRQE IREVIAKGYR FNRVYIGGGT TTILEDELIK
TIEMIKGLTP IREVSCESDP IYFKEGNPQL LNGLVDRMSI GVQSFDDKIL KASGRFEKFG
SGLEQADYVA RAIALIPTVN LDMMYGFKTQ TPESVHWDLK QTLRLKPDQI TTYPLTIGIG
KNRKKAGSLA GDPHALWPQF LAVKKALSGR YLMEFPWTFS RNFGQAVENK YVLDGEDCFG
VGSGAFGRFG EQFRISSFDI QDYIQLIKQQ QSGTCYTKQI ESSALLQHHL MIMMGHGRLD
NSVFYQHTGK TLWQAFPLEM SYLIGAGAIK KDGSQYVTTE QGQFIGLKMF TGFLSGMDYL
REQARDLPLM HQELSAEIV
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