| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3396 |
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| Symbol | |
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| ID | 6117728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4154167 |
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| End bp | 4155786 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634951 |
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| Product | endonuclease I |
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| Protein accession | YP_001761759 |
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| Protein GI | 170727733 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2356] Endonuclease I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAAA TATCAAAATT ATCTGTGGTC GCGCTACTTT CTACATTGGC ATTTAATGCC
AATGCAAATC TATTAATCAG TGAAGCCTTA TATGATGCAC CGAATAATGA CAGCGTTGAA
GAGTACGTTG AGTTGTTTAA TGCAGGCTGT AGTAGCCTTG ATCTGAGCCA GTATCAATTG
AGTGATAATG GCAGCAGCTA TCAGCTGCAG GGCACTATAG CTTCGGGTGA GTATTTCACC
GTTGCAGCCA ATTCTGCAGG GTTTAATAGC CTGTTTAACC AGACTCCAGA TCTATCGCCA
ATGTCTTTAG CCCTGGGAAA TTCGGGTGAC TTTGTACGAT TGAAAAAAGG GGCTGAGGAG
GTTGACCTTG TTGCTTGGGA AGGCGGAGTC ACGGGATGGT CTCTCAATGT TCGCAATGTG
TCTTTGCACA GAACGACTGT GATTAACACT AAATCTGCCG CGGATTGGGC GGCCAGTGAT
AATGCTGGCA ACCCTGGCAC GGGGAGCTTA ATTGCTGACT GTGATGGTGG AGGCGATGGC
GGTGGTAGTG ATAATCAACT GGGTAATGGT CAAGCCAAGA CTGGCTTAAG TGCGGCTCAA
GGTGGGACGC TTAAATTTGT TGCCGATCTT CCCGCTGGTG CCTCAGGAGT CAGTGTGACC
ATGAGTGGTG GCACGGGGGA TGCCGATCTC TACCTTCGTC AAGGCAGTGA GCCAACATTA
AGTGTGTATG ATTGCGCGCC ATATCTGTCA GGTAATAATG AGCAGTGCAG TGTGACTAAC
CCAGTTACTG GACGCTACTA TATTAATCTT CAAGCTTATA GCGCCTTTAG TGGTGTCACT
CTCGTTTTGA ACTACACCGC AGGAACGGGT GGAGGAGACG GTTCTGGTGG TGACAATGGT
GACTATGTTT ATACAACCTA TTATGCCGAT GCCATTGGCA AAACAGGTAG CGCATTAAAA
GCCAGCCTTA ATGGCAAAAT TAAGGGGCAC ACACGTTTTA GTTACAGCCA AGTATGGGAT
GGATTGGGTT ATGCCGATGA AGATCCTGCC AACAGCGATA ATGTAATTTT GCTCTACACT
GGTCGTTCTG AGCCAAAAAC TAATCGTGCA GGCATGAGTA ACTCACTCGA TGCATGGAAT
CGTGAGCATG TTTGGGCAAA AAGCCATGGC TTTCCTAGCA GTGGCCAGCA CGGCTATACC
GATATGCATC ACCTACGTCC GTCTGATGTC ACTGTTAACA GTAGCCGAGG CAATAAAGAT
TTTGCCATGG GAGGCAGCGA GATATCAGAA GCGCCAGGTA ATCGAACTGA TTCTGATAGC
TTCGAGCCCA AAGATGAAGT GAAGGGCGAT GTCGCACGTA TGATCTTCTA TATGGATGTG
CGTTATGAGG GCAGTGATAG CAGTGGTACA CCAGACTTAA GCATTGTAAG CGGAACAACC
ACAACTGGGC AGGCGCTGCT TGGGGATCTG TGTACCTTGC TTAGCTGGCA CCAACAAGAC
CCTGTCAGTG ATTGGGAGCG TCGCCGTAAT AACCGTATTT TTGAGTGGCA AAATAACCGT
AATCCCTTTA TCGATAACAG CAGTTGGGTC GGGGATATTT ACGCGACCTC CTGTCCTTAA
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| Protein sequence | MMEISKLSVV ALLSTLAFNA NANLLISEAL YDAPNNDSVE EYVELFNAGC SSLDLSQYQL
SDNGSSYQLQ GTIASGEYFT VAANSAGFNS LFNQTPDLSP MSLALGNSGD FVRLKKGAEE
VDLVAWEGGV TGWSLNVRNV SLHRTTVINT KSAADWAASD NAGNPGTGSL IADCDGGGDG
GGSDNQLGNG QAKTGLSAAQ GGTLKFVADL PAGASGVSVT MSGGTGDADL YLRQGSEPTL
SVYDCAPYLS GNNEQCSVTN PVTGRYYINL QAYSAFSGVT LVLNYTAGTG GGDGSGGDNG
DYVYTTYYAD AIGKTGSALK ASLNGKIKGH TRFSYSQVWD GLGYADEDPA NSDNVILLYT
GRSEPKTNRA GMSNSLDAWN REHVWAKSHG FPSSGQHGYT DMHHLRPSDV TVNSSRGNKD
FAMGGSEISE APGNRTDSDS FEPKDEVKGD VARMIFYMDV RYEGSDSSGT PDLSIVSGTT
TTGQALLGDL CTLLSWHQQD PVSDWERRRN NRIFEWQNNR NPFIDNSSWV GDIYATSCP
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