| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3381 |
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| Symbol | |
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| ID | 6117713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4138237 |
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| End bp | 4139637 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634937 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001761745 |
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| Protein GI | 170727719 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00620745 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCC TGCCGGCAAT GACTCCGGGC AAACCTTCCC CCCTTAACTC TCTGAAGGCT
AGGCTTATCG TCAGTGCCCT CTTGCTGATC CTCATCCTGA TGCCCTTAAT AGGCTTCACT
CTTAACGATG CCTTTAAACA ACAGGTCAAA ACAGCAGCCA AGAGTGAATT AAGCGCCTAT
ATCTACTCAG TGTTAGCGGT TACTGAGGTT GAAAACAACC AACTGCAGAT GCCAGAGCTT
TTATTAGAAA ATCAATTTAA TGTGATTCAG TCTGGCCTCT ACGCCTTAAT CTCTACTCCC
GAGGGAGATA AAACTAGCAG CAATAAAGTC ACTAAAGAAT GGAAACAAGT TTGGCACTCG
GACTCCTTCT TAGGAATAGA TGAGCCAGCA AACCTTCCTC AACCGGCGAT AGGTCAACGT
GAATTTGCCC AGATAACCCT AGCGGGGAAA GCTCATATTA TCTACAGCCT CAGTGTCAGC
TTCGAGCAGG AGGGGGGAAG CTTTCCTATC ACACTGCATA TCATTAAAGA TCAAGCCGAT
TTTCAACTGC AAATCGATAA ATTTAACCAG ACACTATGGA GCTGGCTACT TCTTCTCATG
GTGCTGCTTG CACTAGCACA GCTCGCTTGG CTCCTATGGA CACTAAAGCC TTTGGCCAAG
TTTAAGCAGG AGCTGCAAGA TGTCGAAAAT GGTAAAACCA TGCAGCTCAG CACAGATTAC
CCTAATGAGT TACAAGCAGT GGCCTATCAG CTTAATACCT TGCTTATTAC CGAACAAAAT
CAGCGCAAGC GTTATCGCAA CGCCCTATCG GATCTTGCCC ACAGTTTGAA AACTCCTCTA
GCGGTGATCC AGAGTCAAAA AGGGCTGGAC AGTACATCTG TCGAGCAGGT CTCAAATATT
AATCGCATCA TAGGGCACCA GCTCAAACGC GCTCAATCTG CCGCTGGCTC ATCTTGGCAT
CTAGGCGTCA AACTTGCGCC CATCTGCGAT AAACTCATCC GCACATTGGG TAAGATCTAT
CGCGAGCCAG AGCTAAAACT CAACAGCAAT GTCGACAAGG ATGCGATCTT CAGAGGCGAT
GAAGCCGACC TCACAGAGGT GTTAGGCAAC CTGCTAGATA ACGCCTGCAA AGCCGCAAAA
GAGCAGGTCA TGTTAGATAT CTCCCTCTCA CATCAGGAGT TAAGCATCAG CATAGAGGAT
GACGGCCCTG GCGTGAGTGA AGAGCTGCAG AGTAAAATCT TTGAAAGAGG AACTCGCGCA
GACTCCTACG AACAGGGACA CGGGATCGGC TTAGCTATCG TTCGAGATCT ACTCGACAGC
TATAACGGCA AGCTTGTTAT TTCCCGTTCA AAAACATTAG GGGGAGCTAG GTTCTGTATA
ACCTTTAACC AAAAAAGCTA A
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| Protein sequence | MKSLPAMTPG KPSPLNSLKA RLIVSALLLI LILMPLIGFT LNDAFKQQVK TAAKSELSAY
IYSVLAVTEV ENNQLQMPEL LLENQFNVIQ SGLYALISTP EGDKTSSNKV TKEWKQVWHS
DSFLGIDEPA NLPQPAIGQR EFAQITLAGK AHIIYSLSVS FEQEGGSFPI TLHIIKDQAD
FQLQIDKFNQ TLWSWLLLLM VLLALAQLAW LLWTLKPLAK FKQELQDVEN GKTMQLSTDY
PNELQAVAYQ LNTLLITEQN QRKRYRNALS DLAHSLKTPL AVIQSQKGLD STSVEQVSNI
NRIIGHQLKR AQSAAGSSWH LGVKLAPICD KLIRTLGKIY REPELKLNSN VDKDAIFRGD
EADLTEVLGN LLDNACKAAK EQVMLDISLS HQELSISIED DGPGVSEELQ SKIFERGTRA
DSYEQGHGIG LAIVRDLLDS YNGKLVISRS KTLGGARFCI TFNQKS
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