Gene Swoo_3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3370 
Symbol 
ID6117702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4127038 
End bp4127583 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content38% 
IMG OID641634926 
Producthypothetical protein 
Protein accessionYP_001761734 
Protein GI170727708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.415293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.288498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATG TATTTTCATT ACTTACATTG ATATTCATGG CGATATTAAC AGGGTGTACA 
TCAACGGCCG AAAACGCACC CGTTGATAAT TACATCACCC ATGATGGCAA CCTTGCCATC
ATCTGGAAAA ATCCCAATCA GTATACAGAT ATAGAATCAA CCATCTGGCT GCAATCTAAA
TTTACCCCCT ACCTGTTTAC AGAGCTTACA GAGGAGCTAG GCAAACAGGT TAATCCTGTA
CTAGGAAAAG ATCAGAAACT AGACATTATG GTCACCAATC TTGATTTGGC TGGCGATGTT
CAACCCACCT TTGGTGCCTC AGCAGATGAT ATCAGGGTTG TATCTGAGCT CTACCCGCCA
AGAATCAATT TCGATTATAG CTTAAGTCAA AATGGCAAAG TGATTAAATC TGGCTCAGAG
AAACTGCAAA ACATGAGTTT CTTATTTGGT ATTCAACCAA TTACGAGTCA ACCTTTTGCA
TATGAATCAG ATCTATTAAA GAAATGGTTT AAAAAAGAGA TAAAGCCCGA TTTGATTAAA
AAATAA
 
Protein sequence
MKYVFSLLTL IFMAILTGCT STAENAPVDN YITHDGNLAI IWKNPNQYTD IESTIWLQSK 
FTPYLFTELT EELGKQVNPV LGKDQKLDIM VTNLDLAGDV QPTFGASADD IRVVSELYPP
RINFDYSLSQ NGKVIKSGSE KLQNMSFLFG IQPITSQPFA YESDLLKKWF KKEIKPDLIK
K