Gene Swoo_3364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3364 
Symbol 
ID6117696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4122590 
End bp4123588 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content44% 
IMG OID641634920 
Productalcohol dehydrogenase 
Protein accessionYP_001761728 
Protein GI170727702 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.357267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.197117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCTC AACAGATCTT ACTTAACTCA CGACCAGAGG GAGTTCCTAC TCCTGATAAT 
TTTAAAATTG CATCTTTGTC ATTGCCAGAA GTCAAAGAGG GAGAGTTTTT AGTCAAAAAC
TTATGGATGT CTGTTGACCC TTATATGCGC GGGCGAATGA TTGACAGGGA GAGTTATATT
GCACCATTTA ATTTAGGTGA AGTTCTTGAT GGTGGTGCGA TAGGGGAGGT GATTGAGTCT
CGTCATGCAG AGTTTCCTGT GGGGAGTAAA GTTACCAGCA TGTTAGGTTG GCGGAGTCAT
TATGTGACTG ATGGCAATGA GCACACTAAG CTACCAGATA TCTCGCTAAG TGAATCACAT
TTTCTTGGTG TTTTAGGCAT GCCGGGAATG ACAGCCTGGA CTGGATTAAC CCGAATTTCT
GAGCTTAAAG CTGGAGAGAC ACTGTTTGTG TCGGCAGCTT CTGGTGCTGT AGGAAGTATT
GCATGCCAGC TTGGCAAGCT AATTGGGGCG AAAGTGATCG CGTCCGTTGG CTCTGATGAA
AAAGCGGCTT ACTTAAAAAG TTTAGGGGTC GATGCTGTGA TTAACTATAA AACAGTGAGT
AATTTGAGTG AAGCATTGAA AGAGGCGGCT CAAGAAGGTG TGGATGTTTA TTTTGAGAAT
GTAGGTGGGG AGCACCTTTC AGCAGCACTG GATAATATGA ATGATCATGG AAGAATTGCG
GTGTGCGGCA TGATTGCACA GTACAATGAT ACCGTACCCA CTCCTGGTCC AAGTAACCTT
GCTATGATCA TCATTAAAAA ATTAAGAGTT GAAGGGTTTA TCGTGTTTGA ACATTGGGCA
CATTATCCTG AGTTTGCTAA AGAGATGGGC CAATGGCTTA CTACTGGTGC CGTTAAGGCT
GAGCAGACGG TTTATGAGGG GCTGGAGAAT GCCTCAACTG CTTTTATCGG GCTATTTGAA
GGTAAGAATT GTGGTAAAAT GGTGGTGAAA TTAGCTTAA
 
Protein sequence
MQAQQILLNS RPEGVPTPDN FKIASLSLPE VKEGEFLVKN LWMSVDPYMR GRMIDRESYI 
APFNLGEVLD GGAIGEVIES RHAEFPVGSK VTSMLGWRSH YVTDGNEHTK LPDISLSESH
FLGVLGMPGM TAWTGLTRIS ELKAGETLFV SAASGAVGSI ACQLGKLIGA KVIASVGSDE
KAAYLKSLGV DAVINYKTVS NLSEALKEAA QEGVDVYFEN VGGEHLSAAL DNMNDHGRIA
VCGMIAQYND TVPTPGPSNL AMIIIKKLRV EGFIVFEHWA HYPEFAKEMG QWLTTGAVKA
EQTVYEGLEN ASTAFIGLFE GKNCGKMVVK LA