Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3358 |
Symbol | |
ID | 6117690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4115720 |
End bp | 4116697 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641634914 |
Product | auxin efflux carrier |
Protein accession | YP_001761722 |
Protein GI | 170727696 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0125073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACCAA TCTTAACCCC GCTGTTTGCT GTACTCGCCA TGATGTTATT AGGCTCCTTA GTACAGAAAC TCAAGATTTT GCCAATTGAT ACGGATCTGG TGCTAAACCA GTACGTCTAT TACGTGGCAT TTCCAGCCAT CATGTTAATC GCACTGGCAG AGACCCCAAT CCACGAGATA CTACAGTGGG GTTTTATCGC TGGATACAGC TTAGCGATGC TGCTGACTTA CCTATTGGTA GTTTTGGTTT CACACATCAC CAATAAGGGG CGTGCCGATC TGGCGGCGCT TAGGGCATTA AATACCACAT TCGGCAATAC CGCTTTTATC GGGATCCCTC TCCTATCTAT GCTCTATCCT GAGCAGCAAA GCGCGCTTAC CGCAGCAGCC ATTGCCAGCT TGCTCTCCGT TATCGTTTTT GCTTTAGTGC TGGTATCAAT TGAACTTTAT CAGGAAAAAG GCGACAACAA GAGAGAGAGA AAACAGTCCC CCTTGCTGAT TATCACACTC TCCTTAATAC AGAATCCAGT AGTCATTGGC AGTGCTATTG GTGTATTCCT ATCTGCCATT GAGTTTAAAC TGTTCGAGCC TCTCTCCATC ATGCTGAGAG ATATCGGTAT GACATCCAGT CCCTGTGCAC TCTTTGCTAT CGGTATGGTG CTTGTAAAAG CGAGCGGCAA CCACGAGATC AGCCACCAGA AACCAAAATG GCTCGACTTA ATTGCCGAGT TGAGCTGGAT AAACCTAGCT AAATTGTTCA TTCAGCCTGC GCTGGCCTAT ATTTTATTAT CAGCGTTTGG AATTGAGGGT GACTACTTCA TTATGGGAGT CCTGTTAGCA GCCCTTCCGA CCGCAGCTAG CGTCTATCTA CTTGCTGAAC GATATCAAGT TAAGGTAATG GTGAGTGCCC AAGCCATTAT GTTAGGGACA CTGTTAAGCA TTGTAACCTT GCCCTTAATA CAAAGTTTTT TGCATTAG
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Protein sequence | MSPILTPLFA VLAMMLLGSL VQKLKILPID TDLVLNQYVY YVAFPAIMLI ALAETPIHEI LQWGFIAGYS LAMLLTYLLV VLVSHITNKG RADLAALRAL NTTFGNTAFI GIPLLSMLYP EQQSALTAAA IASLLSVIVF ALVLVSIELY QEKGDNKRER KQSPLLIITL SLIQNPVVIG SAIGVFLSAI EFKLFEPLSI MLRDIGMTSS PCALFAIGMV LVKASGNHEI SHQKPKWLDL IAELSWINLA KLFIQPALAY ILLSAFGIEG DYFIMGVLLA ALPTAASVYL LAERYQVKVM VSAQAIMLGT LLSIVTLPLI QSFLH
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