Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3343 |
Symbol | |
ID | 6117675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4098712 |
End bp | 4099608 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641634899 |
Product | peptidase M23B |
Protein accession | YP_001761707 |
Protein GI | 170727681 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0875471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000001454 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGCTGGC ATGCTCGAAT TATCTGTATG GTTTGCTTTT TTAATGTTGG CTGTAGTTTT CAGTCCGAAA GGCCAGCTCC TGTCGCCAGT GTGACCACGC CTGTGAAGAC TGCTTATACT AAAGGTGCAT TAAAATTAGA TTTTTATTAC GTTAAGCAAG GTGACACACT TTACTCAATT GCTTGGGCTT CAGATAACGA TTTTTTGGAT TTAGCTAATA AAAACAAGCT GAAGAAGCCC TATACCATCT TTCCTGGACA GAAGTTAAAT CTAAATGTTA CATCAAATGT TACAAATACA AATTTAACTA AGACTCCGTC AAAAAATAGT CATAAAGTTG TACCTAACCC AACTAAACCT AAGGTTAAAC AGGAGGTTAC ACCTGTTTTA GTAGCTAAAA AAACTCAACC TATACCGCCA AAAAAATCAC TTGATCAGCA ACAAAAGTCT GCGTATCCTG TAACAACTGG TCAACAAGAT GTTAACAGTG TTGTCCACAG GCCTAAATCA GAGTTGCCTA CAAAAGTGAC TCGATGGTTA TGGCCGGTAA AAGGGAAGTT AATTGGTACC TTCTCTGCCA AAGAGCAGGG GAATAAGGGA ATAAAGGTAG CTGGAAACCG AGGTGACATA ATAAAAGCCG CAGCCGATGG GCGAGTTGTA TATGCGGGTA GTGCACTTCG AGGGTATGGT AATTTAGTCA TAGTTAAACA TAGCGACGAC TATCTTAGTG CCTATGCCCA TGCTGACAGC ATCTTAGTCA AAGAGAAGCA GTTTGTCACA ATAGGGCAAA CGCTAGCGAA AATGGGTAAT ACAGGTACAG ATCGGGTCAT GCTACATTTT GAGATCCGTC ATCATGGTAA ATCTGTTAAC CCACTGAAAT ACTTACCTAA ACAATGA
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Protein sequence | MSWHARIICM VCFFNVGCSF QSERPAPVAS VTTPVKTAYT KGALKLDFYY VKQGDTLYSI AWASDNDFLD LANKNKLKKP YTIFPGQKLN LNVTSNVTNT NLTKTPSKNS HKVVPNPTKP KVKQEVTPVL VAKKTQPIPP KKSLDQQQKS AYPVTTGQQD VNSVVHRPKS ELPTKVTRWL WPVKGKLIGT FSAKEQGNKG IKVAGNRGDI IKAAADGRVV YAGSALRGYG NLVIVKHSDD YLSAYAHADS ILVKEKQFVT IGQTLAKMGN TGTDRVMLHF EIRHHGKSVN PLKYLPKQ
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