| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3335 |
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| Symbol | |
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| ID | 6117656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4083860 |
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| End bp | 4084990 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634880 |
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| Product | sodium ion-translocating decarboxylase, beta subunit |
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| Protein accession | YP_001761699 |
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| Protein GI | 170727673 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000107525 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGGGT TAATTGCATT TTGGTCTGAG TCCGGTATTG CTAATTTTAC CGGTGGTCAG
TTATTTATGA TGGGTGTCGG TGCACTACTG CTTTACCTAG CAATAGTAAA ACGTTTTGAG
CCACTGCTGC TTTTGCCTAT CGGTTTTGGT GCTATTTTAG CAAATATCCC GAACGGTGGT
TTTACCGATG AGGGGGGCTT ACTCTACTTT GCCTATCATG TGGGGATCGA AACGGGCATA
TTTCCTCTGT TGATCTTTAT GGGGGTTGGT GCACTTACCG ACTTTGGAGC TCTGATAGCT
AACCCTAAAA TGTTACTTTT AGGGGCGGCT GCTCAATTTG GTATCTTTGC AACTTTAATC
GGTGCTGTGG CGCTAAATTT TGTGCCGGGT TTTGATTTTA GTATGAAAGA TGCAGGTGCC
ATTGCCATCA TCGGTGGCGC GGATGGGCCT ACAGCTATCT TCCTTGCTTC CAAACTTGCC
CCAGATCTGC TGGGAGCTAT TGCAGTGGCT GCGTACTCTT ATATGGCGCT AGTTCCTCTT
ATTCAGCCTC CAATTATGAA ACTCTTTACC ACTGAGGCTG AACGTCAGAT AAAGATGGAG
CAGTTAAGGG AGGTGAGTAA GAAGGAGAAG ATTATTTTCC CGCTTATGGT ACTTGGCTTA
ACAATTCTGT TTCTGCCAGC AGCGACGCCT TTAGTGGGGA TGTTCTGTCT TGGTAATCTG
ATGCGTGAAT CCGGTGTTGT GGATAGATTA TCCAATACGG CTCAAAATGA GTTGATCAAT
ATCGTTACCA TCTTCCTAGG TTTAGCGGTG GGCTCAAAGT TGTCGGCGGA TAAGTTTTTG
CAAATTGAGA CCTTAGGAAT TTTGCTTCTT GGGGCGGTTG CCTTCGCTAT TGGTACCGCG
ACCGGTGTAC TGATGGCGAA GCTGATGTCT AAGCTGTCAG GAGGTAAGAT CAACCCACTA
ATAGGAGCTG CTGGTGTCTC TGCTGTGCCT ATGGCCGCAA GAGTCGTGAA TAAGGTTGGG
CTAGAGTCTA ACCAACATAA CTTCTTGTTA ATGCATGCTA TGGGACCCAA TGTGGCGGGC
GTACTTGGGT CGGCCGTCGC CGCTGGTGTG TTGATTGCTG TACTAGGTTA G
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| Protein sequence | MDGLIAFWSE SGIANFTGGQ LFMMGVGALL LYLAIVKRFE PLLLLPIGFG AILANIPNGG
FTDEGGLLYF AYHVGIETGI FPLLIFMGVG ALTDFGALIA NPKMLLLGAA AQFGIFATLI
GAVALNFVPG FDFSMKDAGA IAIIGGADGP TAIFLASKLA PDLLGAIAVA AYSYMALVPL
IQPPIMKLFT TEAERQIKME QLREVSKKEK IIFPLMVLGL TILFLPAATP LVGMFCLGNL
MRESGVVDRL SNTAQNELIN IVTIFLGLAV GSKLSADKFL QIETLGILLL GAVAFAIGTA
TGVLMAKLMS KLSGGKINPL IGAAGVSAVP MAARVVNKVG LESNQHNFLL MHAMGPNVAG
VLGSAVAAGV LIAVLG
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