| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3331 |
|---|
| Symbol | |
|---|
| ID | 6117652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 4080651 |
|---|
| End bp | 4080986 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641634876 |
|---|
| Product | SecC motif-containing protein |
|---|
| Protein accession | YP_001761695 |
|---|
| Protein GI | 170727669 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00112384 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATA AATTTTTCTT TAAAGGGCGT AAAACCCCTA AGCCTAAACA TGAAAGTTTT
GGCTACAACA CTAAGCGCGC CTCAAAACTT GGTACGAGTG ATAATCCTCT TAACTTAGTT
GTTAATAGTG AAGCCCGAAA AGCCGAAATA GAGGCACTAC TAAGCAGCCA CGAGCTAACG
GCTAATATTG AAATTAATCC AGAGGCAAAA GAGAATACAC TTGAACTAGA TGGTGTATTA
AATAAACCTC AAACCACTCG ATTCGATAAG AAGCCCAACA GAAATGAGCC TTGTCCTTGC
GGTAGTGGCA ATAAGTTTAA AAAGTGCTGT GGTTAA
|
|---|
| Protein sequence | MSDKFFFKGR KTPKPKHESF GYNTKRASKL GTSDNPLNLV VNSEARKAEI EALLSSHELT
ANIEINPEAK ENTLELDGVL NKPQTTRFDK KPNRNEPCPC GSGNKFKKCC G
|
|---|
| |