| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3327 |
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| Symbol | |
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| ID | 6117648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4075324 |
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| End bp | 4078158 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634872 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_001761691 |
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| Protein GI | 170727665 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00235124 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGAAGAT GGATATTAGC CGTGGCTATC TCCGCCGCGT TGGCAGGATG TGCAAGTCAA
GAGGCCGAGT CAAACCTACC TAAAGGTATC AGCCTGATTG AATCGGTTAG CCTAGCTGAT
TCAGAGGTAG GTATTGCCTA TAAAAAATAT CAACTTGCTA ATGGCCTCAC GGTTCTACTG
CATCAAGATA GCTCAGATCC TTTAGTGCAT GTAGATGTGA CCTACCATGT GGGCTCGGCG
AGAGAGCTCG AGGGCCGTTC AGGCTTTGCT CACCTTTTTG AACATATGAT GTTTCAAGGT
TCTCAGCATG TTGGTGATGA GCAGCACTTT AAAACAGTGA CCGAAGCGGG CGGAAACCTT
AACGGTACGA CCAACACTGA TAGAACCAAC TATTTTGAAA CTGTACCCAG TAATCAGTTG
GAGAAGATGC TCTGGCTTGA ATCAGATCGT ATGGGCTTTT TCCTTCCTGC GTTAACGGAG
GAAAAGTTTG AGGTTCAGCG TGAAACCGTC AAAAATGAAC GTGCTCAGCG CATCGACAAT
CAGCCATATG GCCGTATGGG TGAGCAGTTT AATCAAGCTT TCTACCCCCA GGGACATCAA
TACTCTTGGC CTGTGATTGG TTGGCCTGAA GATCTGGAAC GGGCGAGTTT AGCTGATGTT
AAAAACTTCT TTAAACGTTG GTATGGACCT AATAACGCCA CTTTAACCGT GGGTGGTGAT
TTTGATGAGT TGCAAACGTT AGCTTGGATA AATAAGTACT TTGGTGAGAT CCCATCAGGG
CCCGAAGTCA CATCAGATAC CAAGTCTTTA GTCACCTTAG ATAAGACCCG TTATATCTCA
ATGGAAGACA AGGTGCACCT TCCTTTGATT CGAATTGGTT TCCCAACCGT TTATGCTCGC
CATGAAGATG AAGCGGCGCT GGATCTGCTC TCTAACATTC TCGGAGGTGG CAAAACCTCT
ATCTTCTATA AAAACTTAGT TAAAGATGGT TATGCCGTTC AGGCGGGAGT GAGCCACCCT
TGTCAGGAAC TTGCCTGTCA GTTTTCTATG TACGCCTTGG CGAACCCTGC CAAAGGCGGG
CAGCTAAAAG ATCTTGAGCA GAAGATGAAG GAGTCCATTG AGGAGTTTGA AGCTCGCGGC
GTGACAGATG AAGATCTGCA GAAGGTGAAG GTGCAATTTG AAGCCGGTAC CATCTTCGGT
CTGCAAAGTG TCTCTGGTAA GGTGTCGACA CTGGCCTTTA ATCAGACATT TTCGGGCAAC
CCGAATATGA TAGCTTCAGA CTTAGCTCGC TACGCCAATG TCACAAAAGC CGACGTGATG
CGCGTCTTTA ATACTTACAT TAAAAATAAG CCTATGGTGG TGATAAGTGT GGTGCCTGAA
GGGCAGAAGC AGTTGATTGC CCATGAAGAT AATTTTACTC CACCTGTACT GACGGTATCA
GATGCTGCAG TAGAAGAGCT AGATACACAT CAACAGATCA CCTCATCATT TGATCGAACG
GTTATGCCTG CTGCGGGTGA AGCACCGATG CTTAAATCTC CAGAGCTATG GCGCGGCAAA
CTTGCTAATG GCATTGAGGT AATTGGCACC GAGAGTGAAG AGACGCCGAC GGTTGAGCTA
GTGATATATC TCAATGGTGG TCACAGGTTA GTGCCTGTTA GCAAAGCTGG GCTTGCAGGG
TTAACCGCGG CCATGCTTAA TGAGTCAAGT CAGAAGCATA GTGCAGAGGA GCTGGCGCAA
GCATTGGAGA TGTTAGGTAG CCGTGTGAGC TTTGGAGCCA GTGGTTATCA GAGCTACATT
CAGATCTCGA GTTTAACCTC TCATCTAGAT GAAACCTTGG CCATTGTCGA AGAGCGCCTG
TTTCAGCCAG CCTTCAAAAG TGAAGATTTC AAGCGTCTTA AACAGCAGCA GCTCCAAAGT
CTGCAGCATA TGATGTCAGA TCCTAACTAT ATAGCCGAAA CCGCATTTGA TGGTTTACTC
TACGGCACCG AGAGCCCGCT AGGGGTTAGC AGTAATGGCA CCTTAGAGAC GGTATCAGGG
TTAACCTTAG AGGATATAAA GGCTTTTTAT CGTCAGCAAT ATACAGGCGG TAATGCACAA
GTTGTCGCTG TGAGTAACCT TAATGAAAGT GAGGTGCTGG CCAAACTTAG TGGATTATCT
CACTGGACTG GTGAGGCTTC GACTTTACCT GCATTAACAG ATTTGCCAGA ACTTAAAGGT
GGAACGGTTT ACATTTTGGA TAAACCTGGC GCCGCTCAGT CGGTTATCAA GATAGGTAAG
CAAGGGTTGC CATGGGATGC GACAGGAGAG TTCTTTAAAT CGTACCTGAT GAACTATCCC
CTAGGCGGCG CTTTTAATAG TCGTATTAAC CTTAACCTTC GTGAAGATAA AGGTTACACC
TATGGTGCTC GAAGTTACTT CTCTGGTGGC ATTGAGCTTG GTGTATTTGA AGCTAAAGCG
AGTGTGAGAA CCGATGTAAC CGCTCCCTCT TTGGTTGAAT TTGCTAAAGA GATTAACCGA
TATCAAGCTA ACGGAATGAC AGATAAAGAG CTGGCCTTTA TGAAAGCCTC TATCTCTCAA
GGTAAGGCGC TTGATTATGA GACTCCTTAC CAAAAAGCTG GCTTTATGCG TCGTATCCAG
CGTTACGGCC TTGATGCTAA CTTTACCGAT AAACAGACTG AGATCACTAA GAGTGTGACT
AAGTCTGAGC TAAATCAACT AGCGAAAGAG CAGTTAAAGC TTGAGAAGAT GATCCTTGTG
ATTGTGGGGG ATAGGGCCAA GATTGAGGCG GATATTAAAG CACTTGGATA TCCAGTTTCG
ATTTTAGAGT TGTAA
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| Protein sequence | MRRWILAVAI SAALAGCASQ EAESNLPKGI SLIESVSLAD SEVGIAYKKY QLANGLTVLL
HQDSSDPLVH VDVTYHVGSA RELEGRSGFA HLFEHMMFQG SQHVGDEQHF KTVTEAGGNL
NGTTNTDRTN YFETVPSNQL EKMLWLESDR MGFFLPALTE EKFEVQRETV KNERAQRIDN
QPYGRMGEQF NQAFYPQGHQ YSWPVIGWPE DLERASLADV KNFFKRWYGP NNATLTVGGD
FDELQTLAWI NKYFGEIPSG PEVTSDTKSL VTLDKTRYIS MEDKVHLPLI RIGFPTVYAR
HEDEAALDLL SNILGGGKTS IFYKNLVKDG YAVQAGVSHP CQELACQFSM YALANPAKGG
QLKDLEQKMK ESIEEFEARG VTDEDLQKVK VQFEAGTIFG LQSVSGKVST LAFNQTFSGN
PNMIASDLAR YANVTKADVM RVFNTYIKNK PMVVISVVPE GQKQLIAHED NFTPPVLTVS
DAAVEELDTH QQITSSFDRT VMPAAGEAPM LKSPELWRGK LANGIEVIGT ESEETPTVEL
VIYLNGGHRL VPVSKAGLAG LTAAMLNESS QKHSAEELAQ ALEMLGSRVS FGASGYQSYI
QISSLTSHLD ETLAIVEERL FQPAFKSEDF KRLKQQQLQS LQHMMSDPNY IAETAFDGLL
YGTESPLGVS SNGTLETVSG LTLEDIKAFY RQQYTGGNAQ VVAVSNLNES EVLAKLSGLS
HWTGEASTLP ALTDLPELKG GTVYILDKPG AAQSVIKIGK QGLPWDATGE FFKSYLMNYP
LGGAFNSRIN LNLREDKGYT YGARSYFSGG IELGVFEAKA SVRTDVTAPS LVEFAKEINR
YQANGMTDKE LAFMKASISQ GKALDYETPY QKAGFMRRIQ RYGLDANFTD KQTEITKSVT
KSELNQLAKE QLKLEKMILV IVGDRAKIEA DIKALGYPVS ILEL
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