| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3322 |
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| Symbol | |
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| ID | 6117643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4070397 |
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| End bp | 4071545 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634867 |
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| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
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| Protein accession | YP_001761686 |
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| Protein GI | 170727660 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.13699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.001488 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAACATAT TAGTTTTAGG TGCTGGACAA CTAGCACGTA TGATGAGTTT AGAGGGGGCG
CCACTGGATT TGAATGTGCG CGCTTTTGAT GTCGGCTCTC AAAAAATCAT TCATCCACTT
ACCCATCAAG TGTTTGAGCA AAGCTTAGGG CAAGCTATCT CAATGGTTGA TGTGATAACC
TCTGAGTTTG AGCATATTCC TGACGATGTC TTAGCTCTGT GCTGCCAAAG TGGCAAGTTC
TACCCAGGTA AAGCTGCCAT CAAAACAGGT GGTGATCGCA GTATTGAGAA AGATCTACTC
GATAAAACCG GGGTTCCATC AGCTCCCTAT CAGTTGATCA CTGAGAAACA GCACCTGTTA
GATGCCGTGT CCCAGCTCGA CTTACCTCTT GTGATAAAAA CTTGCCAAGC GGGTTATGAT
GGTAAAGGAC AGTGGCGTTT AAAGTCATTA GATCAAGTTG ACGCTATTTG GGCTGAGATG
GCCGGATTTA TTGCCAGTGG AACTGAGAGT TTTCCCCACA CCATTATTGC AGAAAAAATG
ATCCCATTTG ATCGTGAAGT CTCTGTGATT GGAGCCCGTG ATAAAGAGGG TAATGTAAAA
ATTTATCCCG TCACTGAAAA CCAACATACC AATGGCGTAC TCACTCTATC CCTAGCGATT
GAGATGGATG AAAAAATCCA GCAGCAAGCC GTCGATGCCT TTAACAAGCT CTCGCTCTCT
ATGAATTATG TTGGTGTATT GGCTATCGAG TTTTTTGAGG TTTCAGGCAC CTTGATGGTT
AATGAGATCG CCCCTCGAGT GCATAATTCA GGTCACTGGA CACAACAAGG GACTGCTTGC
AGTCAATTTG AAAACCACCT GCGCGCAGTT GCCGGATTGC CACTAGGTTG CACACAAGCG
CAAAAGCCAA GCGTGATGAT CAATGTGTTG GGTCAAGGCG CAATTCCATC GCAAGTGCTA
ACTATTGATG ATGTTAAAAG CCACTGGTAT GGCAAAACTC AACGGGCTGG TCGAAAAATG
GGACATATTA ATGTTTCAGC TGAAGATAAC AGCGCATTAG GCAATAAACT GTTGCAACTG
GCTGATATGT TACCTGAGCA AGATTACCCT GGCGTGCGGT TAACAGCCGA GCGGTTATTA
AATAGCTAA
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| Protein sequence | MNILVLGAGQ LARMMSLEGA PLDLNVRAFD VGSQKIIHPL THQVFEQSLG QAISMVDVIT
SEFEHIPDDV LALCCQSGKF YPGKAAIKTG GDRSIEKDLL DKTGVPSAPY QLITEKQHLL
DAVSQLDLPL VIKTCQAGYD GKGQWRLKSL DQVDAIWAEM AGFIASGTES FPHTIIAEKM
IPFDREVSVI GARDKEGNVK IYPVTENQHT NGVLTLSLAI EMDEKIQQQA VDAFNKLSLS
MNYVGVLAIE FFEVSGTLMV NEIAPRVHNS GHWTQQGTAC SQFENHLRAV AGLPLGCTQA
QKPSVMINVL GQGAIPSQVL TIDDVKSHWY GKTQRAGRKM GHINVSAEDN SALGNKLLQL
ADMLPEQDYP GVRLTAERLL NS
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