| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3320 |
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| Symbol | |
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| ID | 6117641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4067934 |
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| End bp | 4069655 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634865 |
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| Product | putative sulfate transporter YchM |
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| Protein accession | YP_001761684 |
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| Protein GI | 170727658 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0232868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00197509 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCACATA AAGCTCATCT ATTCTCTCTC TCTTTGGGTC ATGCTTTTTC TGAAGCTTGT
ATCAAGGAGA AATACAACCT CAAACGCCTA GGGAAAGACC TACTTGCGGG GATCTCAGTG
GGGATTATCG CCATTCCTTT AGCGATGGCC CTTGCCATCG CCAGTGGTGT ACCTCCCCAA
TATGGACTTT ACACCGCGAT TATTGGCGGG TTTATCATCT CTTTGACTGG TGGATCGCGA
TACAGCATAT CAGGTCCAAC TGCTGCATTT GTTGTACTGC TCTACCCCAT AGCCCAAGAG
TTCGGTCTTG CAGGTTTACT GATGGCAACG GTGATGTCTG GCGTTATCTT AGTCATCATG
TCGCTGTTAA AGCTTGGGCG ACTTATTCAG TATATCCCCG AACCTGTCAC TTTAGGCTTT
ACTGCTGGGA TCGGAGTGGT AATCGCGACA CTGCAACTTA AAGATTTCTT CGGGCTCACC
ATGGCTGAGA TGCCTGAGCA CTATATTGAC AAATTAGGTG CGCTTGCAGA TGCAATGCCC
ACCATAGGGA GTGCTAGCAC CAGCGTCGCT TTAGCGACAT TTGCAGTTAT GCTCTTATGG
CCTAAATTAA AAACGCCGAT CCCTGCACAT CTACCCGCCA TCATTATCGG CAGTTTTCTC
GCACTCTGGT TTAATCAAGA TGGAACTGTA GTTGAAACCA TAGGCACACG CTTTAGCTAT
ACCTTAGCCG ATGGCAGCAT CGGCATGGGG ATCCCACCTT TGATGCCAAG TTTTGAGTTA
CCTTGGCTAC AAGATGGGGC CAATCATCAA GCCTTAGGTT TTAGTTGGAG CATGGTACAA
GCTCTACTTC CCAGTGCCTT TGCAATCGCT ATGTTAGGTG CGATTGAATC CCTTTTATGT
GCCGTTGTAC TCGATGGAAT GACAGGGAAA AGACACAGCG CCAATAGTGA GCTTCTTGGT
CAGGGGATCG GTAATATTAT CGCCCCTTTC TTTGGTGGCA TCCCAGCAAC AGCAGCCATA
GCAAGAAGTG CAGCCAATGT GAAAGCTGGC GCTCAGAGCC CGATAGCAGG CATGATCCAC
TCCATTGTTT TGCTACTGGG TCTGCTTCTG TTAACCAATA TCCTCGCCTA TCTTCCTATG
CCAGCCATGG CGGCTCTGCT ACTCGTTGTC GCTTGGAACA TGAGTGAGGC ACCTAAGGCT
GTACACCTGA TAAAATCCGC GCCTAAGAGC GATATTATCG TCTTCCTCAC CTGCTTCTCA
CTGACCGTTA TTTTCGACAT GGTGATTGCG ATCACTGTCG GAATAGTATT GGCCGCCCTG
CTATTTATGA AAGAGATTGC CGAGATGACT AGGCTCTATG ATATTAGCCA AAATAGGCGT
TATATCGACC GGGACATTCC ACAGCACTGG TCGGTATTGA AAGTCAACGG TCCGCTGTTT
TTTGCCGCTG CCGATTCTAT CTTCTCTGAG ATAACCCTAT TAGCAAAGGA GCGACAAACC
ATCGTTATCT ATATGGACGG CGTCTCTATT TTAGATGCAG GAGGCTTAGC GTCATTAACT
AAGTTACTGG AACATCTAAA GACAAAGCAG AGCGAACTGG TGATCACCGA TCTGCAGTTC
CAGCCCATCC GAACTTTAGC AAGGGCAAAA ATACAACCCA TAGATGGCTT ACTGCACTTC
TATCCAACTC TGAGTGACGC TCTGGAAAAG CATCCCCATT AG
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| Protein sequence | MPHKAHLFSL SLGHAFSEAC IKEKYNLKRL GKDLLAGISV GIIAIPLAMA LAIASGVPPQ
YGLYTAIIGG FIISLTGGSR YSISGPTAAF VVLLYPIAQE FGLAGLLMAT VMSGVILVIM
SLLKLGRLIQ YIPEPVTLGF TAGIGVVIAT LQLKDFFGLT MAEMPEHYID KLGALADAMP
TIGSASTSVA LATFAVMLLW PKLKTPIPAH LPAIIIGSFL ALWFNQDGTV VETIGTRFSY
TLADGSIGMG IPPLMPSFEL PWLQDGANHQ ALGFSWSMVQ ALLPSAFAIA MLGAIESLLC
AVVLDGMTGK RHSANSELLG QGIGNIIAPF FGGIPATAAI ARSAANVKAG AQSPIAGMIH
SIVLLLGLLL LTNILAYLPM PAMAALLLVV AWNMSEAPKA VHLIKSAPKS DIIVFLTCFS
LTVIFDMVIA ITVGIVLAAL LFMKEIAEMT RLYDISQNRR YIDRDIPQHW SVLKVNGPLF
FAAADSIFSE ITLLAKERQT IVIYMDGVSI LDAGGLASLT KLLEHLKTKQ SELVITDLQF
QPIRTLARAK IQPIDGLLHF YPTLSDALEK HPH
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