| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3319 |
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| Symbol | |
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| ID | 6117640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4065600 |
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| End bp | 4067522 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634864 |
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| Product | von Willebrand factor type A |
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| Protein accession | YP_001761683 |
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| Protein GI | 170727657 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.041713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00219291 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGATTC AACCTCAAAT TAGTGCTAGA GAAAAAGGAT GTAGATTATC CAGAGTTTCA
GCTTCACTGT TATTGAGCTC AAGTTTAGCG TTAGTGGCTT GTAGTGGGCA GCAAGCTATC
GAGTCCAAAG AAGAGAAAGG GGCGAATGAC AATAAGCAAA GTGAGCTCTC CACGGGGAAG
TCTGAGTCCA ATCCTATTGC GGGGAGTTCA CCGAACCAGC AAAGTATCGA TACCGCTTCA
GGGATTGGAG GTACAGAGGT GCAGTCTGAG GCGAGCCAAG GTGAAGTGAG TGTGCGTGAG
ACCTACCGAG CTGCTAAGCA AGCCAGTGAA CGCATGAAAT CCATGAAGGT ACATTCTCGT
CCGGAGTCCT TTGCTCTGAT GGGACTGCCC TCACGTCCAA GCCAAGATAT TTATCTTCCA
GAGCTGCAAA ATCGCGACAA ATTTGAGCGT CAAGTTGCCA ATGGAATTAT GGTTGCAGGG
GAGATCCCGG TCTCTACCTT CTCAATCGAT GTCGATACTG GCAGTTATTC GACCTTGAGA
CGCTCGATTA ATCACGGAGT GCTGCCAGAG AGGGGCACTG TTCGTGTGGA GGAGTTGATT
AACTATTTTG CTTATCAATA CCCCGCACCA GATGCAGGAG AGCAGCCATT TAGTGTGAAT
ACTGAACTTG CGCCATCACC ATACAATCCC CATAAAATGT TGCTTAGGAT TGGTCTTAAA
GGCTTTGAAA AAGAGAAAGC GGATTTAGGG GCTAGTCAGT TAGTATTTCT GCTTGATGTG
TCGGGCTCAA TGTCATCACA AGATAAGCTG CCGCTATTGA AAAATGCTTT GAAGATGTTG
AGTCAACAAC TCGACGAGGG TGATCGTATC TCGATTGTGG TCTATGCCGG TGCATCTGGA
GTCGTGCTTG ATGGGGTCAA AGGTAACGAT ACCCTTGCCA TCTCCCAGGC TCTGGATAAA
TTAAAAGCGG GGGGCTCGAC CAATGGAGGC GCAGGGATTG AGCTTGCTTA TCAACTAGCG
CAGAAACATT TCATTGCTGG AGGGGTTAAC CGAGTTATTT TGGCCACAGA TGGTGATTTT
AATGTGGGTG TATCGGATCA GCAGGCTCTG GAAGATATGA TTGAGGAGAA GCGTAAACAA
GGTATTGCCT TGACCACTTT AGGGTTTGGA CAGGGAAACT ATAATGATCA TCTGATGGAG
CAACTGGCTG ATAAAGGTAA TGGTCACTAT GCCTATATCG ACACCTTAAA TGAGGCTCGT
AAAGTGCTGG TGGATGAGAT TAGCGCAACA CTACTGACCA TAGCTAAAGA TGTGAAGGTG
CAGATTGAGT TTAATCCAGC ATTGGTATCT GAGTATCGCC TCATCGGTTA TGAGAACCGA
GCACTAAATC GTGAGGACTT TAATAATGAC AAGGTCGATG CCGGCGAGAT AGGTGCGGGG
CACAGGGTGA CAGCCTTGTA TGAACTTAGT TTTGTGGACA GCCCAAATCA AGCTAACGAT
GTGCTTCGAT ATGGTTTGGA TATCAAGACG GGCAAAGAGA AGTACAGCCG CGATGAGTTA
GCTTATTTGA AACTCAGGTA CAAACCTATA GGCCAAGAGA AGAGTAAGCT TATCAGTTAT
CCGGTTTTAA CAAGCACAGC GATTAATGAG TTTGCCCAAG CCAGTGATGA TTTTAGGTTT
GCGGCCGCAG TGGCAGGCTT TGGTCAACTG ATTAATCACA GCCACTATCT GCATGATATG
GACTATGCCA AGGTAAGTGA CATTGCTCAG GCTGCCATGG GAGAGGATAG TTTTGGTTAT
CGTCATGAAT TTGTGCAACT CACTAAAACC GCAGGTTTAT TGGCTTTACA AACTGAGCCC
GAGCAAGTTG GAAGTGCAGT AGTAGACAAA GAGGGGCGAG CCGTGCACAC TTTCCAGCAT
TAA
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| Protein sequence | MKIQPQISAR EKGCRLSRVS ASLLLSSSLA LVACSGQQAI ESKEEKGAND NKQSELSTGK
SESNPIAGSS PNQQSIDTAS GIGGTEVQSE ASQGEVSVRE TYRAAKQASE RMKSMKVHSR
PESFALMGLP SRPSQDIYLP ELQNRDKFER QVANGIMVAG EIPVSTFSID VDTGSYSTLR
RSINHGVLPE RGTVRVEELI NYFAYQYPAP DAGEQPFSVN TELAPSPYNP HKMLLRIGLK
GFEKEKADLG ASQLVFLLDV SGSMSSQDKL PLLKNALKML SQQLDEGDRI SIVVYAGASG
VVLDGVKGND TLAISQALDK LKAGGSTNGG AGIELAYQLA QKHFIAGGVN RVILATDGDF
NVGVSDQQAL EDMIEEKRKQ GIALTTLGFG QGNYNDHLME QLADKGNGHY AYIDTLNEAR
KVLVDEISAT LLTIAKDVKV QIEFNPALVS EYRLIGYENR ALNREDFNND KVDAGEIGAG
HRVTALYELS FVDSPNQAND VLRYGLDIKT GKEKYSRDEL AYLKLRYKPI GQEKSKLISY
PVLTSTAINE FAQASDDFRF AAAVAGFGQL INHSHYLHDM DYAKVSDIAQ AAMGEDSFGY
RHEFVQLTKT AGLLALQTEP EQVGSAVVDK EGRAVHTFQH
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