| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3315 |
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| Symbol | |
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| ID | 6117636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4060115 |
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| End bp | 4063408 |
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| Gene Length | 3294 bp |
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| Protein Length | 1097 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634860 |
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| Product | peptidase S41 |
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| Protein accession | YP_001761679 |
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| Protein GI | 170727653 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4946] Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000987383 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACCTC GCCTCTCGCT TGTTTGCACC CTATTGGCAT TCGGTGGTCT AAATTTTTCG
ACCGCGATTG CATCAGAATC GACAGCACTT CCTGGTTACT ACCGAGCTCC AGCGCTGAGT
GAAAATACGT TAGTTTTTAC CGCTGAGGGC GATCTCTGGA CTAAGCAGAT GGGTGAGCCG
CAAGCGCAAA GGTTAACGAG TTTGCCTGCA CAGGAGTTAG GGGCAACCAT CTCTAAAGAT
GGTAAGTGGG TGGCTTATGT CGCCAACTAT GAGGGGACCA GTGAGGTCTA TGTTATCCCG
ATAGCGGGTG GTCAGGCCAA GCGAGTCAGT TTTGAAAATA GCCGTGTTCG GGTTCAAGGC
TGGACAGCTG ATGGCAAAGT GCTTTACGCC ACTGATAACG CTTTTGGTCC GGCTAACTAC
TGGGTATTAA GAACGGTTAA CCCCGAGACA TTAGAGGCTC AAGATCTACC ACTAGCCGAT
GCCATTGAAG GGGCAATTGA TGATAAAGGC GAGTACCTTT ACTTTACCCG TTTTGGCCTG
CAAACCACAG GGGATAATGC CAAGGTCTAT CGTGGCGGTG CTAAGGGCGA GTTATGGCGT
TATAAGCTCA ATTCAGATCA AGAGGCGCAG TTATTAACCA GTGCTCATCA AGGCTCTGTT
CGTCAACCTA TGTTGTGGGA CAACCGCCTC TATTTCATCA GTGATGCAGA TGGCAATGAT
AATTTCTGGT CGATGGCACT CGATGGCACT GATATTAAAC AGAGCAGTGA TTTTAAAGAG
TGGTCGGTAC GTGGAGCACG CCTAGATAAC GGCAAGATAG TGTTTCAGCA AGGGGCTGAC
ATTAAGCTGT TTGACCTGAG TAATCATGAA AGCCGCACTT TGGATATTCA ACTGGTTTCT
GACTTTCCCC ATCGCCGTGC TCACTGGGTC AATAGCCCGA TGAAGTATGC GACCTCTACT
CAGCTTTCAC CTGAGGGAAA TAAGGTTGTT ATCACCGCAA GAAGTCATGT TGCGATAGCG
GGAACCGATG GCTCCCGCCT TGTTGAGTTA GCACTTCCCG GAAACAGCCG AGTGCGATCT
GCAGTGATGA GCCCAGACGG GAGCTGGGTG TATGGGATAA GCGATGCATC GGGAGAGCAG
GAGATCTGGC GCTTTCCTGC CGATGGCAGT CAGGGGGCAA AGCAGCTAAC TAAAGATGGC
ACGACTCTAC GGATGGGGAT TAAGCTCTCG CCTGATGGGC GTTATATCGC GACCGATGAT
TACAATGGTG ACCTTTGGCT ATTGGATCTT AAAAGAAACC GCACCAAAAA AATCATTACT
CAAGGTGAAG GCTTAGGTCC CTATGCCGAT GTGGTCTGGT CGGGGGATAG CCAATACATC
GCCGTGACTA AATTTGAGTT AGGCACACCA AGGCCGCAAG TGGTGCTCTA TTCATTGGAT
GATGATCGAA GTGAAGCTTT AACCAGTGAT AAATATGAGT CATATGCACC CGCATTTAGC
CCTGATGGTC AGTGGCTATA TTTTCTCTCA GACCGTCAAT TTAGCTCAAC ACCTACCTCA
CCTTGGGGCG ATCGTAATAT GGGACCCATG TTTGATAAGC GCACTGAAAT ATTTGCTTTA
GCCTTAGATA AAGATGCCAA GTTCCCATTT CGTCAACCAG ATGAGTTAAC TCAAACAACA
TCGGTTGGTA AAGAGGATAA AGCAGCGGGC ACTGCGGACG TTAAAGTCGA TTGGAGTGGT
CTGGGTCAGC GTTTATGGCA GGTGCCAGTT GCTTCGGGTA ACTATTCTGC GCTTAAGGTG
AACGATAACG GCCTCTATTT TATCGATCAG GCTCCGGGCA AAGAGAGTGT ACCGGGCCTT
AAAGTGGTTA AGTTTGACCC ATTATCACCA AAGGTTGAGA CCTTTAGTGA GGATGTTGGC
AGTTTTGGTC TTTCACGCGA CGGCAAGAAG CTCTTTATCC GTAAGCACAG CAAAGATGGT
CAAGATATGT TGATAGTCGA TGCTGCTGAC AAGCTTCCTA AAAAATTAAC CAATGCCAAG
GTACAGACTC AAGCGTGGCA GTTAGCGATA GAGCCTGCAC TTGAGTGGCA GCAGATGTTT
GAAGATGCTT GGCTAATGCA CAGAGACTCC TTCTTTGATA AGCAGATGCG CGGTCTTGAC
TGGCAAGCAA CAAAGCAAAA GTATCAGCCG TTGGTGGACA GATTAACGGA CCGACATGAG
CTCAATGATA TCTTTAAACA GATGATGGGC GAGTTAGACT CACTGCACTC TCAGGTGCGT
GGTGGCGATC TTCCTAAAGA TCTGGATATG GCAAAAGCGG CAAGTCTTGG TGCTCGTTTA
GCGCAGACAA AAAATGGAGT AGCTATCACT CATATCTATG CTAACGATCC TGAGCTGCCA
TCTCAAGCAG CCCCATTAGC CCAGATAGGT GTGGACGCTA AAGTCGGTGA TATCTTGGTG
GAGATTAATG GCAAGAGTGT CACAAACCGC GCCGATGTGA CTCGCTTTTT AACAAATCAG
GCTAAAAAGC AGGTGCTGTT GACCCTCAAG CGGGGCAGTA AACAGCACAA GACCATCGTC
AAACCTGTCT CTCCTGGTCG TGATGCCAAG CTTAGATATT TAGATTGGGT TAATTCAAAC
GCTGAGAAAG TGAGTGAGGC CTGCGACGGA GAGTTTGGTT ACCTGCACCT GTATGCCATG
GGCAGCGGTG ATATTGCCAG CTTTGCCCGT GAGTTTTATG CCAACTACGA TAAAGCGGGT
CTTGTGATTG ATGTTCGCCG TAATCGTGGT GGTAATATCG ATAGTTGGAT TATTGAGAAA
TTACTGCGCA GAACATGGGC TTTCTGGCAG CCAACTCGTG GTACTCCAAG TACTAATATG
CAGCAAACTT TCCGCGGACA CTTAGTGGTG TTGACCGATC AATTGACCTA TTCCGATGGT
GAAACCTTCT CTGCAGGTGT TAAGGCCCTC GGGATCGCCC CACTTATTGG TAAGCAAACC
GCTGGAGCCG GTGTCTGGCT ATCTGGCCGA AATTCATTAA CGGATAAAGG GATGGCTCGG
GTCGCTGAAT ACCCTCAATA TGCGATGGAT GGACGTTGGG TGCTGGAGGG GCGTGGAGTC
AGTCCTGATA TTGAGGTTGA TAACTTACCC TATGCGACTT TTAAAGGTGG TGATGCTCAA
TTAGAGCGTG CCATTAACTA TCTCAAAGAG GAGCTGGTAC AAGCGCCTGT TCTTCCCCTG
AAGGCTCAAC CAATTCCAGC TAAAGGGATG GCTCAGGATA TTACTCGTCA ATAG
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| Protein sequence | MKPRLSLVCT LLAFGGLNFS TAIASESTAL PGYYRAPALS ENTLVFTAEG DLWTKQMGEP
QAQRLTSLPA QELGATISKD GKWVAYVANY EGTSEVYVIP IAGGQAKRVS FENSRVRVQG
WTADGKVLYA TDNAFGPANY WVLRTVNPET LEAQDLPLAD AIEGAIDDKG EYLYFTRFGL
QTTGDNAKVY RGGAKGELWR YKLNSDQEAQ LLTSAHQGSV RQPMLWDNRL YFISDADGND
NFWSMALDGT DIKQSSDFKE WSVRGARLDN GKIVFQQGAD IKLFDLSNHE SRTLDIQLVS
DFPHRRAHWV NSPMKYATST QLSPEGNKVV ITARSHVAIA GTDGSRLVEL ALPGNSRVRS
AVMSPDGSWV YGISDASGEQ EIWRFPADGS QGAKQLTKDG TTLRMGIKLS PDGRYIATDD
YNGDLWLLDL KRNRTKKIIT QGEGLGPYAD VVWSGDSQYI AVTKFELGTP RPQVVLYSLD
DDRSEALTSD KYESYAPAFS PDGQWLYFLS DRQFSSTPTS PWGDRNMGPM FDKRTEIFAL
ALDKDAKFPF RQPDELTQTT SVGKEDKAAG TADVKVDWSG LGQRLWQVPV ASGNYSALKV
NDNGLYFIDQ APGKESVPGL KVVKFDPLSP KVETFSEDVG SFGLSRDGKK LFIRKHSKDG
QDMLIVDAAD KLPKKLTNAK VQTQAWQLAI EPALEWQQMF EDAWLMHRDS FFDKQMRGLD
WQATKQKYQP LVDRLTDRHE LNDIFKQMMG ELDSLHSQVR GGDLPKDLDM AKAASLGARL
AQTKNGVAIT HIYANDPELP SQAAPLAQIG VDAKVGDILV EINGKSVTNR ADVTRFLTNQ
AKKQVLLTLK RGSKQHKTIV KPVSPGRDAK LRYLDWVNSN AEKVSEACDG EFGYLHLYAM
GSGDIASFAR EFYANYDKAG LVIDVRRNRG GNIDSWIIEK LLRRTWAFWQ PTRGTPSTNM
QQTFRGHLVV LTDQLTYSDG ETFSAGVKAL GIAPLIGKQT AGAGVWLSGR NSLTDKGMAR
VAEYPQYAMD GRWVLEGRGV SPDIEVDNLP YATFKGGDAQ LERAINYLKE ELVQAPVLPL
KAQPIPAKGM AQDITRQ
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