| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3306 |
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| Symbol | |
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| ID | 6117627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4048759 |
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| End bp | 4049115 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641634851 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001761670 |
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| Protein GI | 170727644 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.737039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000245663 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAATAA ATCTTTCAGG TCACCACGTT GATGTAACCG ATTCAATCAA AGAGCATGTG
AACGACAAGT TTTCTAAAAT CGCAACTCAT TTCCCGTCGT TAATCTCGCT AGATGTTATC
ATTTCAAAAG AACACGGTGA GCATCAGGTT GAGTTGCGTA CCAATTATGA AGGTAGCCGA
ATTTCAGCTT CAGGAACAAA TGAAATCATG TTCCCAGCCA TTGCTTCAGC AGCCAAAAAG
CTAGATGCAG CGCTTAAACA TCGTAAAGGG CAATTAAAAG CCGATAAGCA TGAGAAGCCT
GTAAGCACGA CTCCAGAGAT TGCTCATGAG ATCATTCAAG AGATGAAACT GGTTTAA
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| Protein sequence | MKINLSGHHV DVTDSIKEHV NDKFSKIATH FPSLISLDVI ISKEHGEHQV ELRTNYEGSR
ISASGTNEIM FPAIASAAKK LDAALKHRKG QLKADKHEKP VSTTPEIAHE IIQEMKLV
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