Gene Swoo_3303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3303 
Symbol 
ID6117624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4045854 
End bp4047044 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content42% 
IMG OID641634848 
Producthypothetical protein 
Protein accessionYP_001761667 
Protein GI170727641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00716702 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000189971 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAAGTTC GTGCACTTAC CCTAGCTATA CTGACAAGTT TATCCGCATC TGCCATCGCA 
GCCGATACGG TTGATCCACT CAAAAAAGCC TTTATTGACG ATTCAGAGAT AAAGCTACAG
TTCCGTTTAC GTTATGAGCA AGCGGATGTT GATAATGTCG ACGATCAGAA TCAAACCACT
CTGCGTACGC GCCTAAACTA TAAGACAGGT GATATCTATA ACTTCTTCGC GCTAGCAGAA
GTTGACGATG TACGCTCAAC CGATGATGAA CCTCTTATTG CCGACTATGA ATACACACAA
ATTAATCAGG CATTTATTGG TTATAAAGCA CCAGCTGACA CACTGCTAAA ATATGGTCGT
CAGCGTATCT TACTCGATAA TCAAAGGTTT GTTGGCGGTG TTGGTTTCCG TCAAAATGAG
CAAACCTATG ATGCGTTTTC GATTCAAAAT ACAGCGGTCA AACATCTGAC TGCTTATTAT
GCTTATGTCA ATAATGTAAA CCGCATTTTC CCTGAAGGTT CAGGCAAGGA TGAGCATAAA
AATGAAACCA GCCTATTAAA CGTTAACTAT AAGGGACTAG ACTTCGTTAA GTTAAGCGGT
TATGCCTACC TTATTGACAA TATCAATGTC GCTAAATTCT CTACCGATAC TTATGGTATT
CGCGCAGCAG GTGGCATTAA GCTAGATAAG ATTAAGCTCA ATTACGAAGC CGAATTTGCT
CAGCAGTCTG AAGGTGGCGA TAACCCAACC AGCTATACTG CTAACTACTA CAAATTAGGT
GCAGGAGTTG GCTTTAACGG TTTTGGAGCT AAGTTAGGCT ATGAGGTCTT AGGCTCTGAT
GATGGTAAAG CAGGCTTTGT CACGCCACTG GCAACCTTGC ACGCCTTTAA CGGCTGGACA
GATAAATTCC TCTTTGGTGG TGCTGGTAAC TGGGAGAACG GCATTGTCGA TACTCATTTT
ATCTTAACGG CGAAAGTCGC TGGCCTTAAA CTTCTAGCCA AGTACCATAA ATTTGACTCA
GATTTTGGTG ATATCGACAT GGGTAAAGAG TGGGGTTTTG CGGCAACTTA TCCATTTGCT
AAACACTATG ATGTGGGCGT GAAATACGCA AGCTTTAGTG GTGCTGATGC AGGATATGGC
TTTTCAAATG ACACCGATAA GCTTTGGTTA ACCCTGCAAG CCAAATACTA A
 
Protein sequence
MKVRALTLAI LTSLSASAIA ADTVDPLKKA FIDDSEIKLQ FRLRYEQADV DNVDDQNQTT 
LRTRLNYKTG DIYNFFALAE VDDVRSTDDE PLIADYEYTQ INQAFIGYKA PADTLLKYGR
QRILLDNQRF VGGVGFRQNE QTYDAFSIQN TAVKHLTAYY AYVNNVNRIF PEGSGKDEHK
NETSLLNVNY KGLDFVKLSG YAYLIDNINV AKFSTDTYGI RAAGGIKLDK IKLNYEAEFA
QQSEGGDNPT SYTANYYKLG AGVGFNGFGA KLGYEVLGSD DGKAGFVTPL ATLHAFNGWT
DKFLFGGAGN WENGIVDTHF ILTAKVAGLK LLAKYHKFDS DFGDIDMGKE WGFAATYPFA
KHYDVGVKYA SFSGADAGYG FSNDTDKLWL TLQAKY