Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3303 |
Symbol | |
ID | 6117624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4045854 |
End bp | 4047044 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641634848 |
Product | hypothetical protein |
Protein accession | YP_001761667 |
Protein GI | 170727641 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00716702 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000189971 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAAGTTC GTGCACTTAC CCTAGCTATA CTGACAAGTT TATCCGCATC TGCCATCGCA GCCGATACGG TTGATCCACT CAAAAAAGCC TTTATTGACG ATTCAGAGAT AAAGCTACAG TTCCGTTTAC GTTATGAGCA AGCGGATGTT GATAATGTCG ACGATCAGAA TCAAACCACT CTGCGTACGC GCCTAAACTA TAAGACAGGT GATATCTATA ACTTCTTCGC GCTAGCAGAA GTTGACGATG TACGCTCAAC CGATGATGAA CCTCTTATTG CCGACTATGA ATACACACAA ATTAATCAGG CATTTATTGG TTATAAAGCA CCAGCTGACA CACTGCTAAA ATATGGTCGT CAGCGTATCT TACTCGATAA TCAAAGGTTT GTTGGCGGTG TTGGTTTCCG TCAAAATGAG CAAACCTATG ATGCGTTTTC GATTCAAAAT ACAGCGGTCA AACATCTGAC TGCTTATTAT GCTTATGTCA ATAATGTAAA CCGCATTTTC CCTGAAGGTT CAGGCAAGGA TGAGCATAAA AATGAAACCA GCCTATTAAA CGTTAACTAT AAGGGACTAG ACTTCGTTAA GTTAAGCGGT TATGCCTACC TTATTGACAA TATCAATGTC GCTAAATTCT CTACCGATAC TTATGGTATT CGCGCAGCAG GTGGCATTAA GCTAGATAAG ATTAAGCTCA ATTACGAAGC CGAATTTGCT CAGCAGTCTG AAGGTGGCGA TAACCCAACC AGCTATACTG CTAACTACTA CAAATTAGGT GCAGGAGTTG GCTTTAACGG TTTTGGAGCT AAGTTAGGCT ATGAGGTCTT AGGCTCTGAT GATGGTAAAG CAGGCTTTGT CACGCCACTG GCAACCTTGC ACGCCTTTAA CGGCTGGACA GATAAATTCC TCTTTGGTGG TGCTGGTAAC TGGGAGAACG GCATTGTCGA TACTCATTTT ATCTTAACGG CGAAAGTCGC TGGCCTTAAA CTTCTAGCCA AGTACCATAA ATTTGACTCA GATTTTGGTG ATATCGACAT GGGTAAAGAG TGGGGTTTTG CGGCAACTTA TCCATTTGCT AAACACTATG ATGTGGGCGT GAAATACGCA AGCTTTAGTG GTGCTGATGC AGGATATGGC TTTTCAAATG ACACCGATAA GCTTTGGTTA ACCCTGCAAG CCAAATACTA A
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Protein sequence | MKVRALTLAI LTSLSASAIA ADTVDPLKKA FIDDSEIKLQ FRLRYEQADV DNVDDQNQTT LRTRLNYKTG DIYNFFALAE VDDVRSTDDE PLIADYEYTQ INQAFIGYKA PADTLLKYGR QRILLDNQRF VGGVGFRQNE QTYDAFSIQN TAVKHLTAYY AYVNNVNRIF PEGSGKDEHK NETSLLNVNY KGLDFVKLSG YAYLIDNINV AKFSTDTYGI RAAGGIKLDK IKLNYEAEFA QQSEGGDNPT SYTANYYKLG AGVGFNGFGA KLGYEVLGSD DGKAGFVTPL ATLHAFNGWT DKFLFGGAGN WENGIVDTHF ILTAKVAGLK LLAKYHKFDS DFGDIDMGKE WGFAATYPFA KHYDVGVKYA SFSGADAGYG FSNDTDKLWL TLQAKY
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