| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3302 |
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| Symbol | |
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| ID | 6117623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4043502 |
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| End bp | 4045523 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634847 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001761666 |
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| Protein GI | 170727640 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.333172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000579682 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAACT CATTACTTGC AGTATCAATT ATCAGCGCAC TATCACTCAA TACATTCGCT
TTTAGCGCTT ACGCAGCTCA ACATGAGCAT GATCACATCA CTGTTAGCTA TCAAGGCAAA
GATGCAACCC GTCACACAGC AGCAGTTAAT AAGGCCACAG CGAAAACACT CAACTTTGCT
GATACGCGTG CTTTTGAACA ATCATCAAAG CAACTTGTCG CTAAATTAGA TGAAAAAACA
GCAAAAATAC TCCGAGCTGA GTTTAAGTTT ATTGGAGAGA AAGCCCCTGA TACGGTCAAT
CCATCTCTGT ATCGTCAAGC CAAGTTGAAC ATGGTGGCAG ATGGGCTCTA TAAGGTGCGC
GACGGTATTT ATCAAGTTAG GGGGACAGAT CTGTCTAATT TGACCTTAAT TCGTAGCGAT
AATGGTTGGA TCGCCTACGA TGTACTCCTT ACCAAAGAGG CCGCAAAAGC ATCCCTTGAG
TTCGCGATGA AAAACCTGCC TCAAGGTGGC CAGTTACCAG TGGTTGCGAT GATCTACTCA
CACAGCCACG CTGATCACTT CGGTGGTGCC AGAGGCGTTC AGGAGCTCTA TCCCAATGTG
AAGGTCTATG GCTCTGATAA CATAACCAAA GAGATTGTCG ACGAGAATGT ACTTGCGGGA
AATGCCATGA GCCGCCGTGC AGCCTATCAA TATGGTGCAA CTCTGGGCCA ACACGACCAT
GGCATTGTCG ATGCGGCGCT AGGCAAAGGC TTGTCTAAAG GGGAGATCTC CTATGTCAGG
CCCGACTATA CCTTAAATAG CGAGTCAAAA TGGGAAACAC TCACCATCGA CGGCCTAGAG
ATGATATTTA TGGATGCATC AGGTACCGAG GCGGCCTCAG AGATGATCAC CTATATTCCG
TCGATGAAGG CACTCTGGAC AGCAGAGCTG ACCTATCAAG GTATGCACAA TATCTACACA
CTTCGCGGCG CTAAAGTACG TGACGCCCAA AAGTGGTCTA AAGATATTAA TGAGATGATC
AATGCATTTG GTGGCGAAGT AGAAACCTTG TTTGCTGCGC ATTCTGCACC AGTTTGGGGT
AACGAGGAGA TCAATGACTT CCTTAAACTG CAAAGAGATA ACTATGGTCT AGTCCATAAC
CAAACACTGC GTTTAGCAAA CCAAGGAGTC ACTATTCAAG ATATTGGTGA TGCTATCCAA
GAGGTGATCC CAGAGTCCAT TTTCAAGGCT TGGCACACTA ACGGCTACCA CGGTACCTAT
AGCCATAATG CTAAAGCGGT TTACAACATG TACTTAGGGT ATTTCGATAT GAACCCTGCA
AACTTAAATC CCCTGCCAAC ACATCCAGAA GCAGTAAAAT TTGTCCAGTA CATGGGTGGA
GCTGATACGG TATTAGCAAA TGCCGAAGCT GACTTTGCTC AAGGAGATTA CCGCTTCGTA
GCAACCGCTC TTAATAAGGT CGTTATGGCA GATCCCAGTA ACAGTAAGGC CCGTGAACTG
CTCGCCGATA CTTATGAGCA GTTAGGCTAT CAATCAGAGG GCGCTGGATG GAGAAATATC
TATCTAACAG GTGCTCAGGA GTTACGAGTT GGTATCCAAC CTGGCACACC TAAAACTGCT
TCAGCCGATG TAATAAGTGA GATGGATATG CCAACACTCT TTGACTTTTT AGCCGTCAAA
ATAGACAGCC TTAAAGCAGC TAAGCAGGGG TTAGTTACCA TGAATGTGAT CACCCCAGAT
GACAATCGCA TTCTCTATGT TGAGATGAGC AATGGCAACT TAAGCAATAT CGAAGTCACG
ACGCCAAAAG ACTCAGATGC TAATCTCACT ATTAATAAGG CAGATGTAAA CCGTATCTTG
ATGGGAGAAG TCAAGCTTAC GGAGCTGCTC GCCAACGGCA GTGCCAAGCT AACGGGAGAT
AAAGATGCCT TTAGCAAAAT ATCTTCAAGC TTAGTTGAGT TTAACACCGA CTTTGAAATC
GTCCCATTAA ACCCTAACCA GAAGGGTGAG CATAAACACT AA
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| Protein sequence | MKNSLLAVSI ISALSLNTFA FSAYAAQHEH DHITVSYQGK DATRHTAAVN KATAKTLNFA
DTRAFEQSSK QLVAKLDEKT AKILRAEFKF IGEKAPDTVN PSLYRQAKLN MVADGLYKVR
DGIYQVRGTD LSNLTLIRSD NGWIAYDVLL TKEAAKASLE FAMKNLPQGG QLPVVAMIYS
HSHADHFGGA RGVQELYPNV KVYGSDNITK EIVDENVLAG NAMSRRAAYQ YGATLGQHDH
GIVDAALGKG LSKGEISYVR PDYTLNSESK WETLTIDGLE MIFMDASGTE AASEMITYIP
SMKALWTAEL TYQGMHNIYT LRGAKVRDAQ KWSKDINEMI NAFGGEVETL FAAHSAPVWG
NEEINDFLKL QRDNYGLVHN QTLRLANQGV TIQDIGDAIQ EVIPESIFKA WHTNGYHGTY
SHNAKAVYNM YLGYFDMNPA NLNPLPTHPE AVKFVQYMGG ADTVLANAEA DFAQGDYRFV
ATALNKVVMA DPSNSKAREL LADTYEQLGY QSEGAGWRNI YLTGAQELRV GIQPGTPKTA
SADVISEMDM PTLFDFLAVK IDSLKAAKQG LVTMNVITPD DNRILYVEMS NGNLSNIEVT
TPKDSDANLT INKADVNRIL MGEVKLTELL ANGSAKLTGD KDAFSKISSS LVEFNTDFEI
VPLNPNQKGE HKH
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