| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3301 |
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| Symbol | |
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| ID | 6117622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4042433 |
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| End bp | 4043341 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634846 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001761665 |
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| Protein GI | 170727639 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000341492 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTCAAG AAAAACCATT GGATTTGAAC TTACTGCGTG TCTTCTCCAT TGTCTGTAAA
ACGGCTTCGT TTAGCCGAGC GGCAGAGGAG CTAAACTTGA CTCAATCGTC GGTGAGTAAC
GCCATTGCAA GATTGAAGTT ATCTATTGGT GAGGAGCTGT TTATTCGTGT TGGCCGGGGA
GTTAAGCCAA CATCGGTTGC ATTAAACCTT TATCAACAAC TTGAACAGCC CCTACTGGCT
ATTGAGCAGG TGGTGTCAGG TTTACACCTG TTTGATCCTA AGCAGAGCAA GCGAAGCTTC
TATGTTTATG CGAATGAAAC AATTATTCAG CTATTGCAAA CCCGGGTAGA TGAATACTTA
TGTGATAGCG CAATTGATAT CGTGTTTCGC GAAACCCCAA TAGGGGAGGA GCAGATACAG
ATGGATCTGC AGCTGGAGAA GGTAGATCTG GCCTTGGATA TTACGCAACC CCATCTGGCC
TCTTTTGCTT CGACAAAAGT CATGCAGGAT AGATTGAACT GTGTGGTTAG AAAGGAACAC
CCTAGAATTC AGGGAAGTTT AAGCACAGAG CAGTATTTTG CTGAGAAGCA TATTATTCAT
AACATGCGCC GCTCTAATCT GAGCATGGCT GATCTAATGA CCAAGGAGGT GCTTCCCAAA
AGAGAGATGT ATGGTGAGCA ATCGTCTTTG TTAAATATGC TGGCGACAGC GGCTAAATCC
AATGCCATCG CGGTAGCAAC ACAATCATAC ACGGATGCTT ATGCTGAGTT ATTTGGCTTA
CAGGTATTAC CGCTCCCCTT TGTGACAGAG CCGATTGATC TGTATATGGT GTGGTGTAAA
AAGTTACAGC ACAATGCGGC TAACCTTTGG CTAAGGGAGA CCTTATTACT GTTAATCAAG
TCGTCGTGA
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| Protein sequence | MSQEKPLDLN LLRVFSIVCK TASFSRAAEE LNLTQSSVSN AIARLKLSIG EELFIRVGRG
VKPTSVALNL YQQLEQPLLA IEQVVSGLHL FDPKQSKRSF YVYANETIIQ LLQTRVDEYL
CDSAIDIVFR ETPIGEEQIQ MDLQLEKVDL ALDITQPHLA SFASTKVMQD RLNCVVRKEH
PRIQGSLSTE QYFAEKHIIH NMRRSNLSMA DLMTKEVLPK REMYGEQSSL LNMLATAAKS
NAIAVATQSY TDAYAELFGL QVLPLPFVTE PIDLYMVWCK KLQHNAANLW LRETLLLLIK
SS
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