| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3287 |
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| Symbol | |
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| ID | 6117607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4031013 |
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| End bp | 4032479 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634832 |
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| Product | phosphotransferase system EIIC |
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| Protein accession | YP_001761652 |
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| Protein GI | 170727626 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.898046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000239228 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTACAG ATCTGGAACA CCCAAATCGA TATCGAAACC TCTTAACCTA TCTTCAAGAG
CACTGGTTTA GGTTTGCTCA AAGGCTGAGC CAAGCACTGC TTATTCCTAT TGCTATCTTG
CCGGCAGCTG GAGTGATGCT TGGTTTAGCG AAGAGTCCGC TGCCTTTTAT TCCTGATATT
GTTAATGTCA TTATGCTGAC CGTCGGTAAC CTTATCTTTA GTATGATGCC GATGCTATTT
GCTGTGGCTG TTGCTATTGG ATTTTGTCGG GATCAAGGTA TTGCCGCATT CAGTGCGGTT
TTTGGCTTTG GTGTATATCT GTCTAGCATG GCGGCATTGG CGGATATATA TCACCTGCAA
ACCAGAGCGT TGTGGGGAGT TGAAACCATA GATACAGGAA TAGCGGGCGG CATGTTAGTG
GGAGCTATCA CTTGCCTTGC CGTGTCACAG AGTGAGCGCT TACGCCTCCC TGTAGTGTTC
TCATTTTTTG AAGGTCGACG AAGTGCCCCG CTATTAATGA TCCCTCTTTG TATCTTGCTT
GCTTATCTGT TTATCCTGAT ATGGCCATCT ATGTCGGCTT GGATTGAGAG GTTATCAAAC
TGGGTAGTTT ATCAAAAGCC TGCAGAAGCA TTTGCACTCT ATGGTGCGGT TGAGCGTCTG
CTTATTCCTT TGGGCTTACA CCATATTTGG AATGCTCCTT TTTACCTAGA ATTTGGTCAA
TACTTTAGAG ATGGTGAGGT CGTAAGAGGC GAGGTTGCTC GTTATTTAGC TGGCGACCCA
TTGGCAGGTA ATTTAGCGGG AGGGTATCTT ATTAAGATGT GGGGCCTGCC TGCCGCTGCA
TTAGCCATAT GGCGCTGCGC TGATAAAGAT CAAAGAAATC GAGTGGCGGG GATCATGATC
TCAGCCGCCA CAGCTTGTTG GCTGACAGGG GTGACTGAGC CCATTGAGTT TGCTTTTCTT
TTTGTGGCGC CTTTACTGTT TTTAATACAT GCGCTGCTAA CTGGATTAGC CTACTGGGTA
TGTATCTTAT TGGATATTCA TCATAGTATC GTTTTTTCCC ATGGAGTTGT GGATTTTACT
CTTTTACTCG GAAACGCTCA GAGAGCTGAA TGGTTCCTGA TATTGGGCCC CATAACCGGT
GTGCTTTATT ACCTAATCTT TAGAGGGTCG ATATTATTTT TTGATCTTAA GACACCTGGA
AGAGTGGTTC ATACTGATGG GATGAAAGCG GATATCCCTA GTATAGTGCG CGCGTTAGGA
GGGAGGAAAA ACATCCTTGA ATTGAGTGCT TGTCTGACCC GTTTGCGAAT GAGTGTTAAG
AAACCTGAAT TAATTGATAA AGATAAATTG AATCAGTTAG GCGCTAAAGG GGTTATCTTG
GTAGGTAACG GAGTACAACT AGTGTATGGG ACGAAAGCTG AAAGTATTCG TAGATTACTT
CAGCGATATA TTGATAGGCG TCTTTGA
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| Protein sequence | MATDLEHPNR YRNLLTYLQE HWFRFAQRLS QALLIPIAIL PAAGVMLGLA KSPLPFIPDI
VNVIMLTVGN LIFSMMPMLF AVAVAIGFCR DQGIAAFSAV FGFGVYLSSM AALADIYHLQ
TRALWGVETI DTGIAGGMLV GAITCLAVSQ SERLRLPVVF SFFEGRRSAP LLMIPLCILL
AYLFILIWPS MSAWIERLSN WVVYQKPAEA FALYGAVERL LIPLGLHHIW NAPFYLEFGQ
YFRDGEVVRG EVARYLAGDP LAGNLAGGYL IKMWGLPAAA LAIWRCADKD QRNRVAGIMI
SAATACWLTG VTEPIEFAFL FVAPLLFLIH ALLTGLAYWV CILLDIHHSI VFSHGVVDFT
LLLGNAQRAE WFLILGPITG VLYYLIFRGS ILFFDLKTPG RVVHTDGMKA DIPSIVRALG
GRKNILELSA CLTRLRMSVK KPELIDKDKL NQLGAKGVIL VGNGVQLVYG TKAESIRRLL
QRYIDRRL
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