Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3280 |
Symbol | tsf |
ID | 6117599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4022649 |
End bp | 4023497 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641634824 |
Product | elongation factor Ts |
Protein accession | YP_001761645 |
Protein GI | 170727619 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000141167 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000739911 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAATTA CTGCTGCCCA AGTTAAAGAA CTTCGTGACC GCACTGGCGC TGGCATGATG GACTGTAAAA AAGCACTGAC TGAAACAGCC GGTGACATCG AACTAGCGAT TGATAACATG CGTAAGAGCG GTGCTGCAAA GGCTGCTAAG AAAGCAGGTA ACATCGCTGC TGAAGGTACA ATCCTAATTA AGAATGGCGA AGGTTATGCC GCGCTGTTAG AAGTTAACTG TCAAACTGAC TTCGTAGCAA AAGATTCTAA CTTCCTAGCT TTCGCTAACG AAGTGCTAGA CGTTGCTGCT GCATCTAAAG TAACAATCGA AGATCTGAAA GCTCAGTTCG AAGAGACTCG TGTTGCTCTT GTTGCGAAAA TCGGTGAGAA CATCAACGTA CGTCGCGTAG AGTACATCGA TGGTGCAAAC CTTGCTCAAT ACCGTCACGG TGAGCGTATC GGTGTTGTTG TAACCGGTGA AGCTGATGAA GAGACTCTAA AGCACGTTGC AATGCACGTT GCTGCTTCTA AGCCTGAGTA TGTTAACCCT TCTGACGTTC CTGCTGAAGT TGTTGAGAAA GAAAAAGCAC TTCAAATCGA AATCGCTATG AACGAAGGCA AGCCTGCTGA AATCGCTGAG AAGATGGTTA TCGGCCGTAT GAAGAAGTTT ACCGGTGAAG TTTCTCTTAC TGGCCAAGCT TACATCATGG AACCTAAGAA AACTGTTGGT GAAGTTCTTA AAGAGAAAGG CGCTAGCGTT TCAAACTTCA TTCGTTTAGA AGTTGGCGAA GGTATCGAGA GAAAAGAAGA AGATTTTGCT GCAGAAGTTG CTGCACAAAT CGCTGCTACT AAGGCTTAA
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Protein sequence | MAITAAQVKE LRDRTGAGMM DCKKALTETA GDIELAIDNM RKSGAAKAAK KAGNIAAEGT ILIKNGEGYA ALLEVNCQTD FVAKDSNFLA FANEVLDVAA ASKVTIEDLK AQFEETRVAL VAKIGENINV RRVEYIDGAN LAQYRHGERI GVVVTGEADE ETLKHVAMHV AASKPEYVNP SDVPAEVVEK EKALQIEIAM NEGKPAEIAE KMVIGRMKKF TGEVSLTGQA YIMEPKKTVG EVLKEKGASV SNFIRLEVGE GIERKEEDFA AEVAAQIAAT KA
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