| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3279 |
|---|
| Symbol | pyrH |
|---|
| ID | 6117598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4021825 |
|---|
| End bp | 4022562 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641634823 |
|---|
| Product | uridylate kinase |
|---|
| Protein accession | YP_001761644 |
|---|
| Protein GI | 170727618 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0528] Uridylate kinase |
|---|
| TIGRFAM ID | [TIGR02075] uridylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00055393 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000297429 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGA ATCCTAAACC TGCATTTCGA CGTATTCTTC TTAAACTCAG TGGTGAAGCC
CTAATGGGCG AAGAAGGCTT TGGCATAGAT CCTAAAGTGT TGGATCGTAT GGCTCAGGAG
ATAAAAGAAC TGGTTGAGCT TGGCATTCAG GTAGGTGTTG TTATCGGTGG TGGTAACTTA
TTTCGTGGGG AAGGGCTAGC ACAGGCTGGT ATGAACCGCG TAGTGGGTGA TCACATGGGT
ATGCTAGCAA CTGTGATGAA CGGCTTGGCG ATGCGTGATG CATTGCACCG TGCCTATGTA
AATGCAAGAC TGATGTCTGC AATTCCGCTT AAAGGCGTAT GTGATGATTA TAACTGGGCA
GAAGCGATTA GCTTACTAAA ATCCGGCCGT GTTGTTATTT TTGCTGCGGG TACTGGTAAT
CCATTCTGCA CAACTGACTC TGCTGCCTGT TTACGCGGTA TTGAGATCGA AGCTGAAGTC
GTTTTAAAGG GCACAAAAGT AGACGGCGTT TACTCAGATG ACCCTGTTAA AAATCCAGAT
GCAGTAAAGT ACGACGAAAT GGGTTACGAT GAAGTACTTG AAAAAGAATT AAAAGTGATG
GATCTTGCTG CGTTTACCAT GGCGAGAGAT CACGATATGC CTCTATTGGT ATTTAACATG
AACAAACCTG GTGCTCTACG CCGCGTTATT ATGGGTGAGC ATGAAGGGAC TATGATCAGG
GCAAGCCGTC CCGAGTAA
|
|---|
| Protein sequence | MSTNPKPAFR RILLKLSGEA LMGEEGFGID PKVLDRMAQE IKELVELGIQ VGVVIGGGNL
FRGEGLAQAG MNRVVGDHMG MLATVMNGLA MRDALHRAYV NARLMSAIPL KGVCDDYNWA
EAISLLKSGR VVIFAAGTGN PFCTTDSAAC LRGIEIEAEV VLKGTKVDGV YSDDPVKNPD
AVKYDEMGYD EVLEKELKVM DLAAFTMARD HDMPLLVFNM NKPGALRRVI MGEHEGTMIR
ASRPE
|
|---|
| |