| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3277 |
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| Symbol | |
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| ID | 6117596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4020322 |
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| End bp | 4021116 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634821 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_001761642 |
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| Protein GI | 170727616 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000667775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000316349 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGATCG ACTCCCAATC TGGTCCTGAG TTCTCTGCTG AAGAGCTCGC AGAACTTGTT
AAGCTGTCTA TTCCCAAGCA TGTTGCCATC ATTATGGATG GTAATGGTCG CTGGGCGCAG
GCGCAGGGTA AGCCTAGGGT CATGGGGCAT AAAGCGGGTG TAAAAACAGT GAGGCGTGCG
GTAAGTACTG CCAGAGAGAT GGGGATTGAC TCGTTAACAC TGTTTGCCTT TTCGAGTGAA
AATTGGCGTA GACCCGATAA AGAGGTGACC CTCTTGATGG AGCTGTTTTT TACCGTGCTT
CAACGAGAGA TTAAGTTGCT ACATAAAAAC GGCGTAAGAT TGAATATCAT CGGTGATATT
AGCCGTTTTT CAGAACGACT ACAGAAGCAG ATCGCTGCGG CAGAAGAGAA AACTGCTGAG
AATACTGGCA TGGTTCTCAA TGTGGCTGCT AACTATGGTG GTCGTTGGGA TATCATGCAA
GCGGCTAAAA CATTAGCTGA AAAAGTACAA TCTGGTGAAA TGAACAGCAA TCAGTTCACT
GAAGAGGCCC TTAGCCAACA TTTAAGCATG CAAAATCAGC CTGAAGTTGA TTTAATGATC
CGTACAGGTG GCGATTACCG CATCAGTAAC TTTGTTCTCT GGCAAGCTGC CTACGCAGAG
CTAGTGTTTA CTGATACGCT ATGGCCGGAT TTCGATGAGC ATGCTTTTAA GCAGGCAGTA
GCGACCTTTG CTTCAAGGCA ACGTCGATTT GGTTTGACAG GCTGTCAAAT AGAGTCGTTG
CAAGAAAATA AATAA
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| Protein sequence | MSIDSQSGPE FSAEELAELV KLSIPKHVAI IMDGNGRWAQ AQGKPRVMGH KAGVKTVRRA
VSTAREMGID SLTLFAFSSE NWRRPDKEVT LLMELFFTVL QREIKLLHKN GVRLNIIGDI
SRFSERLQKQ IAAAEEKTAE NTGMVLNVAA NYGGRWDIMQ AAKTLAEKVQ SGEMNSNQFT
EEALSQHLSM QNQPEVDLMI RTGGDYRISN FVLWQAAYAE LVFTDTLWPD FDEHAFKQAV
ATFASRQRRF GLTGCQIESL QENK
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