| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3276 |
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| Symbol | |
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| ID | 6117595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4019449 |
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| End bp | 4020306 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641634820 |
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| Product | phosphatidate cytidylyltransferase |
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| Protein accession | YP_001761641 |
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| Protein GI | 170727615 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0575] CDP-diglyceride synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000594072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000341805 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCTAAAAC AACGAATAAT AACGGCAATT TGGTTAATTC CCTTGGTTTT GGGGGCTATT
TTTGGGCTCC CCACAGAATA CTTCTCCTGG GCTCTTATAG GTGTATTTCT GATCGCAGCC
AAGGAGTGGG GGCAGATAAT CGATAAACGC TGTCAAATGA CGCAGTGGAG CTTCACCATC
ACCATAGGTG TTTTGCTTGT AGCACTTAAT CTGTTTGTTC CAAGTGATGA ACTTTGGTTT
AAAGGTCAAC TTCATCCTGT ATTTCTTTCG ATTATTCTCA TTGGTGCTAT CTGGTGGGCT
GTTGCATTTC TTTTGGTGAT ATCTTTCCCT AAAAGCGCTG CATTGTGGCA AAAAAGTCAC
ATGTTTAAGT CTATGTTTGG ACAACTCACA TTGATCCCAT GCTATACGGC TCTTGTTGCA
CTTAAGGGAT TGAGCACTCA AGTCGATCCA TACTATGGCG GCTCTCTTGT CTTTCTAGTG
ATGCTAGTCG TATGGGCAAC CGATAGTGGC GCTTACTTTG CAGGAAAGGC ATTGGGTCGT
ACTAAGTTAA TGCCAAATGT GAGCCCAGCT AAAACTATCG AAGGCTTAGT TGGCGGTTTA
GCCATGAGTA TGTTGATAGT GGTTGGAATA ATGCAGGTTT CTCCTGAGCA GGAGTTAGGC
TTACTGGTTT GTGTAACACT TTTTGTGGCC TTGGTTTCTG CCGTTGGCGA CTTGTCTGAG
AGCATGTTTA AACGTGTTGC TCAGATTAAA GATTCTGGCA AGATATTACC AGGTCACGGT
GGGGTGCTAG ATCGTATTGA TAGCTTAACG GCCGCACTGC CTATATTTAC ACTAATCTAT
ATCGCATTTT GGATGTAA
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| Protein sequence | MLKQRIITAI WLIPLVLGAI FGLPTEYFSW ALIGVFLIAA KEWGQIIDKR CQMTQWSFTI
TIGVLLVALN LFVPSDELWF KGQLHPVFLS IILIGAIWWA VAFLLVISFP KSAALWQKSH
MFKSMFGQLT LIPCYTALVA LKGLSTQVDP YYGGSLVFLV MLVVWATDSG AYFAGKALGR
TKLMPNVSPA KTIEGLVGGL AMSMLIVVGI MQVSPEQELG LLVCVTLFVA LVSAVGDLSE
SMFKRVAQIK DSGKILPGHG GVLDRIDSLT AALPIFTLIY IAFWM
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