| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3274 |
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| Symbol | |
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| ID | 6117593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4016852 |
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| End bp | 4018237 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634818 |
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| Product | membrane-associated zinc metalloprotease |
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| Protein accession | YP_001761639 |
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| Protein GI | 170727613 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000455239 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000441416 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGATT TTTTATGGAA CTTAGGTTCC TTTATCATTG CGTTAGGTAT ATTAATTACT
GCACATGAAT ATGGCCATTT TTGGGTTGCC AGACGCTGTG GTGTTAGGGT CGAGCGTTTC
TCTATCGGTT TCGGTAAGGC GATTTGGCGT AAAGTGGGTA AAGACGGGAC AGAGTATGTC
ATCGCGCTTA TCCCGCTTGG CGGCTATGTT AAGATGCTCG ATGAGAGAGT CGATGATGTT
CCTGAGGAGC TTAAAGAGCA GGCATTTAAT CGCAAATCTG TGTGGCAGCG CATTGCTATC
GTTGCCGCAG GACCGCTAGC TAACTTTATT TTCGCTATTA TTGCTTTGTA CTTTATGTAT
TTGATTGGTG TCCCATCAAT CAAACCTGTC ATAGATACCA CTACAAAGAA TACGCCTGCA
GAGCTGATTC AGGTGCAAGA GCCGATGCAG ATAACCTCTG TGGGTGGAAA AACAGTGAGA
AATTGGGAAG AGGTGACCTA TGCCTTAGTT GGTCATATTG GTGATCCAGA GATAGCGTTA
ACGCTTAGAC CCATGAGCCA AAACAGTGAA GTTAACGACT CAACCCCGTT AAATTTAGGT
AAAACCTATA CATTAGATAC TAAAAACTGG CAGTTTGATC CAGATAAAGA GTCGCCAATT
ACCTCATTAG GTTTAGGTAT CTATAGGCCT GCTATTACAC CAGTATTAGG CCTTGTTAGT
CCAGATGGTG CTGCAGCAGC TGCCGGTATT GAAGTCGGCG ACAGTTTAGT CTCAATGAAT
GGCGAGCCTT ATCAGAGTTG GGATGGCTTT GTTGAAGTGA TAAAGTCTTC TGCAAATAAA
CCTGTAGAGC TAATGGTGAG ACGTGGTGGC GAGCAGCTTA AATTTATCGT TACCCCCCAT
GAAAGAAAAG GCGCTCAGGG CGAGATTGAG GGAGTGATAG GAATCGCTCC AACTCAAGCT
GCTTGGCCTG AGAGCATGAA ACTCCAGCTG GAATATGGTT TTATCGAATC TTTTGCGGTA
GCGGCAGATA AAACATGGCA ACTTGTCGAT GTCAGCTTTA AGATGATTGG CAAGTTGATC
TCCGGCGACG TTTCGGTGAA AAATTTAAGT GGACCAATAT CCATTGCACA AGGTGCGGGT
AGTAGTGCTA ACTATGGATT GGTTTACTTT TTAGGTTTCC TCGCGTTAAT CAGCGTTAAC
TTAGGTATTA TCAATTTATT ACCTTTACCA GTGCTTGATG GGGGACATCT GTTATATTAC
TTCGTTGAAG TGATCACAGG CAGGCCTGTA CCAGAAAAGG TTCAGGAAAT TGGATTCAGA
TTTGGGGCAG CTATGCTGCT AATGTTGATG AGCATTGCGC TTTTCAATGA TTTCTCCCGA
CTCTGA
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| Protein sequence | MIDFLWNLGS FIIALGILIT AHEYGHFWVA RRCGVRVERF SIGFGKAIWR KVGKDGTEYV
IALIPLGGYV KMLDERVDDV PEELKEQAFN RKSVWQRIAI VAAGPLANFI FAIIALYFMY
LIGVPSIKPV IDTTTKNTPA ELIQVQEPMQ ITSVGGKTVR NWEEVTYALV GHIGDPEIAL
TLRPMSQNSE VNDSTPLNLG KTYTLDTKNW QFDPDKESPI TSLGLGIYRP AITPVLGLVS
PDGAAAAAGI EVGDSLVSMN GEPYQSWDGF VEVIKSSANK PVELMVRRGG EQLKFIVTPH
ERKGAQGEIE GVIGIAPTQA AWPESMKLQL EYGFIESFAV AADKTWQLVD VSFKMIGKLI
SGDVSVKNLS GPISIAQGAG SSANYGLVYF LGFLALISVN LGIINLLPLP VLDGGHLLYY
FVEVITGRPV PEKVQEIGFR FGAAMLLMLM SIALFNDFSR L
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