| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3265 |
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| Symbol | |
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| ID | 6117584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4004507 |
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| End bp | 4005919 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634809 |
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| Product | tRNA(Ile)-lysidine synthetase |
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| Protein accession | YP_001761630 |
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| Protein GI | 170727604 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
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| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.867953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.290599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC CTAGTTTTAA TACATCAGCC TTGATTGAAG AGAGTATTAA GTCTGCGAAG
ATCAATGTTG GTGCTAAGTT AGTACTGGCT TACAGCGGAG GGGTTGACTC AGAAGTACTA
GCTCAAGGTC TATCCTTATA TGCTAAATCG CACCCAGAGT TCCGTTATCT GTTAGTGCAT
GTTCACCATG GGCTGAGTCG TAATGCCGAT GCTTGGGTAA CACATTGCCA GAAGCAAGCG
CTAGATTATC AACTTCCGAT CGAGGTTGTT CAGGTTCAGG TAAAAACAGG TCCTAGACTT
AGCATTGAAG CAGAAGCTCG TCGCGCACGT TATAAGGCGA TAACGTCCTT GATGGACAGT
GCAGATGTGT TGTTAACTGC GCACCACTTA GATGACCAAT TAGAGACAGT CCTGTTAGCA
CTAAAGCGTG GGCTAGGGCC TAAAGGTCTG TCAGCTATGG GTGCATTGCA GGTGTTCGAT
GGGGATAAGC AACTGCTCCG CCCCTTACTG AATGTCAGCC GTGAGCAGAT AGAAGCCAAG
GCTGCGAGCC TATCTCTGCC GCATATCGAA GATGAAAGTA ATACTGATGA TAAGTATGAC
AGGAACTTTT TACGTCTGCA GATCATCCCT AAGTTAAAAT CTAGATGGAG CGCTATTGCG
ACGACTGCAA GCCGTAGTGC AGCCCTTTGT GCTCAACAAC AAGCGGTCAT TGATGATGAG
GTAAGTGCTC GCTTACCTAA CTTCATTGAG CTGGTGCCAT ACGGCGAAGG AACTGCATTA
AATCTGGACT TATTAAGCCA TCAAACTCCC AATTGGCAGG CATTGTTGCT TAGAGGGTAT
ATTGAGAGCT CTGGCTTTGC CCCTGTATCT CAAATCCAGC TTGAACAGTT ATTGTCTCAG
TTACTGACCG CTAAGCCTGA TGCTAACCTT GAAGTGAGAA TCGCTGATAT GTTGGTGCGC
AGGTTTAGAG AGAAAGCATA CCTAAGCTCA TACAGACCCC ATAAGCCAAA ATCACTGGAG
AGTATTGAGC TGACTCTTGA GAGTGAAGTT CATTTCGTTC AAGAGATAAA CATTCCGCTC
TTATCTAATA TCAGAGTTGA AGTGCTTGAG GATGATGGGG GAGAGAGAGT TCGTCTGCCA
TTGATTGAGG AAAAGGTATC GGTTCGTTTC TCTGCTGTTG GCAGTTTGCG TTGCCATCCA
CATAACAGAC AAAAGGGCAG GGAACTTAAA AAACTTTGGC AGGAGTATGG GGTGCCGCCC
TGGGAGAGGG AGCGAGTCCC ACTTATTTTT TATAATGAAA AGCTTGTCTG CGCTGTTGGT
TATTGGGTTG AGCACTCTTT TCAATCTGCA GAGCATGAAA CGGGTTTACG TTTCTCGATA
GCTATTGTTT CTAATGAGTG TGAGTCGATT TAG
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| Protein sequence | MTEPSFNTSA LIEESIKSAK INVGAKLVLA YSGGVDSEVL AQGLSLYAKS HPEFRYLLVH
VHHGLSRNAD AWVTHCQKQA LDYQLPIEVV QVQVKTGPRL SIEAEARRAR YKAITSLMDS
ADVLLTAHHL DDQLETVLLA LKRGLGPKGL SAMGALQVFD GDKQLLRPLL NVSREQIEAK
AASLSLPHIE DESNTDDKYD RNFLRLQIIP KLKSRWSAIA TTASRSAALC AQQQAVIDDE
VSARLPNFIE LVPYGEGTAL NLDLLSHQTP NWQALLLRGY IESSGFAPVS QIQLEQLLSQ
LLTAKPDANL EVRIADMLVR RFREKAYLSS YRPHKPKSLE SIELTLESEV HFVQEINIPL
LSNIRVEVLE DDGGERVRLP LIEEKVSVRF SAVGSLRCHP HNRQKGRELK KLWQEYGVPP
WERERVPLIF YNEKLVCAVG YWVEHSFQSA EHETGLRFSI AIVSNECESI
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