| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3264 |
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| Symbol | |
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| ID | 6117583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4003629 |
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| End bp | 4004510 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641634808 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001761629 |
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| Protein GI | 170727603 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.399065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTTG GCTTAGCAGC AGAGTTTTCA CCGGAAGAGT ATCGATATCA ACCTGAAATA
TATCAGGTGA ATGATCCCGA ACCTGATTTG GTGAAAATAA TTCAACACTT ACATGAAAGT
TTAGATCCTA GGACAGTTTT TGCCTGCTTC GGCAAGATAA TGGGACAATA CTTGCCCATT
GATGGCGTAC AGATGACCTT TAAACGCCAC CAATTTAACT GGGGAAGGAC TCAGGGGATC
AAAGTTACTC AGCAGCTCGC TTTTTCAGGA GAGGCTGCAA ACTTAACATA CTCACTGAAA
AGCCCATTAA CTCCCTCTCA ATCCCAGCGA TTACAGACAA TGCAAACCTT AGTCTTGTTG
CCTCTGTTTA ATGCTATCCA GTTTCAAGAT ATATCACAAA AAGCCATGTA TGACTCTTTA
ACTAAGCTTG GTAATCGACA TTATTATGCC GAAAGTTTAA AAAAGGCCAT TGCGACCTCT
AGTCGACATG ATAATCCCCT CTCTATTGTT ATATTGGACT TAGATAACTT TAAAAAACTC
AATGACAGTT ACGGCCACCT TTTAGGTGAT GAGGTACTCT CAGAGTTTGG TCAACTGCTC
ACTTCGGCCA TCAGAGATAC TGATCAGGCA TTTCGTGTCG GTGGTGATGA GTTTGTGGTG
ATTGTCAGGG GTGATGTCAA AGCGGCAAGT GTTCTTTGTG AGCGAGTTTT AACCTCCATC
TCAAGCCATA GTCTGTTTGA GAAGTACCAA GCTATGACCA GTTTAGGGGT CTCCCAATGG
AAACAAGATG AGACCGCAAC CGATGTTTAT GAACGCGCAG ATAAGGCGCT ATATCGAGCA
AAAGCCGCTG GTCGACGATG CTTTAAAGTC GATGAAATCT AA
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| Protein sequence | MDFGLAAEFS PEEYRYQPEI YQVNDPEPDL VKIIQHLHES LDPRTVFACF GKIMGQYLPI
DGVQMTFKRH QFNWGRTQGI KVTQQLAFSG EAANLTYSLK SPLTPSQSQR LQTMQTLVLL
PLFNAIQFQD ISQKAMYDSL TKLGNRHYYA ESLKKAIATS SRHDNPLSIV ILDLDNFKKL
NDSYGHLLGD EVLSEFGQLL TSAIRDTDQA FRVGGDEFVV IVRGDVKAAS VLCERVLTSI
SSHSLFEKYQ AMTSLGVSQW KQDETATDVY ERADKALYRA KAAGRRCFKV DEI
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