| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3255 |
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| Symbol | |
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| ID | 6117574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3990193 |
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| End bp | 3991917 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634799 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_001761620 |
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| Protein GI | 170727594 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.208883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGGA AAAACCAGAC AACAGCGCTT TTCATGCTGA TATTCGGCCT GTTAGCAGGT
ATTTTTTGCC ACCACTATAT CGACAAGCAA TGGCTAGAGA GAGCTGTCAG CTATGAGCTT
TATTCGAACC TCGATGGCCA ACTCGCTTAT AAATTCAAAG GCAAAGAGAT ACTCGTAGGA
GAGCTAATCC CCTATCAACT CTCCCCTTTA TCCCAAGAAA ATCTAGATAA ACTTGAAACT
GAGCCAAGTA TTGAACAGCA GTGGGTACAG GACTCTCAAG GTTCAATACG CTTACTCAAA
CCTGCATTTC ACTTTGGAGT CTGGTCACTG CTACCCGCTT TCATTACTGT CTGTTTATGC
TTACTCACCC GTGAACCCTT AATATCACTA TTGACTGGCA TCATAGTCGG TGCATTTATG
CTGGGACAGT TCGATGTTAT CGATAAAGTG CTCATTCCAA ATTTAGCCAG CGAAGGGACG
GCGGGCTTGT TACTGCTCTA TCTGTGGTTA TTGGGAGGAC TGTTAGGGAT CTGGACCAAG
ACAGGCGCAG CACAAGCTTT TGCAGACTAT ATGGCCAAGC ATTTTGTTAA AGGACCTAAA
AGTGCCAAAT TAGTCACTTG GCTTCTTGGG GTACTCTTTT TCCAAGGTGG TACCATGAGT
ACCGTGCTTG TAGGCACAAC AGTGCGCCCT TTAGCAGATA AAGCCAAAGT GAGTCACGAA
GAGATGAGCT ACATTGTTGA CTCTACCGCC TCCCCCATCG CAGCTGTGCT TGCTTTTAAT
GCTTGGCCAG CTTATGTTCA AGCCCTCATC TTTGTCCCTG GTGTGGCCTT TCTTGCCACT
GAATCAGATA GATTGAGCTT CTTTTTTAGC AGTATTCCCT TTAGTTTTTA CGGTATTTTT
GCCGTATTAG GTACTCTTCT GCTCAGCTTA AACATCACCA AGTTTTCAGG AAAACGTATC
CAACAAGCTC ACCAAAGAGC GGCAACAACC GGCGCGCTTG ATGCTCCCCA CGCTAGGCCT
TTGAGTGCCA AAGAGCTACA AACAGTTGCA GTACCCGCCA ACTATCGATC CAATATGCTG
GAGTTTGTTG TGCCCCTAGT CTGCCTAATT AGTATCGCAA TAGGCACTTT TATAGCCCTG
GGGTCACCTA AAGTGAACTG GGCATTCACC GCTGCACTGT TACTTTCTGG CGGTATTGCG
CTTATCAAAG GGATGAGCTT AAACGACCTC ATTGATGGCT TCGGTACTGG GCTTAAAGGC
GTCGTACTCG CTTCAGTAAT TTTAATGTTA GCGGTGATCA TAGGTAGCAT TAGTAAGCAG
ATTGGTGGCG GTCTATACCT AGTGTCACTG CTGGCCGAGC AATTACCCTA TTGGCTGGTA
CCACTAACAT TACAGCTGAT CACTATGATC ATCGCTTTCT CTACAGGTAC CAGTTGGGGA
ACTTACGCTA TCGCCTTCCC TCTTGCTATG CCTCTTGCAT GGGAGATATC TCAAGTACAA
CAGCTGGCGA ATCCAGAGCT TTACTTAATG ATCTGTTTTG CCACTGTGCT AAATGGCAGT
ATTTACGGCG ATCAATGCTC GCCAATCTCA GATACTACCG TGTTGAGCGC CATGACGACT
GGCTGCGATC TTATGGATCA TGTAAAGTCC CAAATCGTCC CCGCGTCACT TGCCGCCGCC
ATGGCGGCTA TCCTTTGGGC CGCATTAGTG TATATCTATG TTTAA
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| Protein sequence | MMRKNQTTAL FMLIFGLLAG IFCHHYIDKQ WLERAVSYEL YSNLDGQLAY KFKGKEILVG
ELIPYQLSPL SQENLDKLET EPSIEQQWVQ DSQGSIRLLK PAFHFGVWSL LPAFITVCLC
LLTREPLISL LTGIIVGAFM LGQFDVIDKV LIPNLASEGT AGLLLLYLWL LGGLLGIWTK
TGAAQAFADY MAKHFVKGPK SAKLVTWLLG VLFFQGGTMS TVLVGTTVRP LADKAKVSHE
EMSYIVDSTA SPIAAVLAFN AWPAYVQALI FVPGVAFLAT ESDRLSFFFS SIPFSFYGIF
AVLGTLLLSL NITKFSGKRI QQAHQRAATT GALDAPHARP LSAKELQTVA VPANYRSNML
EFVVPLVCLI SIAIGTFIAL GSPKVNWAFT AALLLSGGIA LIKGMSLNDL IDGFGTGLKG
VVLASVILML AVIIGSISKQ IGGGLYLVSL LAEQLPYWLV PLTLQLITMI IAFSTGTSWG
TYAIAFPLAM PLAWEISQVQ QLANPELYLM ICFATVLNGS IYGDQCSPIS DTTVLSAMTT
GCDLMDHVKS QIVPASLAAA MAAILWAALV YIYV
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